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Protein
Submitted name:

Outer membrane assembly lipoprotein YfiO

Gene

Rmar_0679

Organism
Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) (Rhodothermus obamensis)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciRMAR518766:GJJ8-685-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Outer membrane assembly lipoprotein YfiOImported
Gene namesi
Ordered Locus Names:Rmar_0679Imported
OrganismiRhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) (Rhodothermus obamensis)Imported
Taxonomic identifieri518766 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesBacteroidetes Order II. Incertae sedisRhodothermaceaeRhodothermus
Proteomesi
  • UP000002221 Componenti: Chromosome

PTM / Processingi

Keywords - PTMi

LipoproteinImported

Interactioni

Protein-protein interaction databases

STRINGi518766.Rmar_0679.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3QKYX-ray2.15A24-280[»]
SMRiD0MFQ0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini34 – 104TPR_REGIONInterPro annotationAdd BLAST71
Domaini214 – 247TPR_REGIONInterPro annotationAdd BLAST34

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili152 – 179Sequence analysisAdd BLAST28

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiENOG4108N8J. Bacteria.
ENOG410ZZRH. LUCA.
HOGENOMiHOG000106318.
KOiK05807.
OMAiGYQFERF.
OrthoDBiPOG091H048Z.

Family and domain databases

CDDicd15830. BamD. 1 hit.
Gene3Di1.25.40.10. 3 hits.
InterProiView protein in InterPro
IPR017689. BamD.
IPR013026. TPR-contain_dom.
IPR011990. TPR-like_helical_dom_sf.
IPR019734. TPR_repeat.
SMARTiView protein in SMART
SM00028. TPR. 5 hits.
SUPFAMiSSF48452. SSF48452. 2 hits.
TIGRFAMsiTIGR03302. OM_YfiO. 1 hit.
PROSITEiView protein in PROSITE
PS50293. TPR_REGION. 2 hits.

Sequencei

Sequence statusi: Complete.

D0MFQ0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLKSFRQIGG GWLLVIGLLV AGCAGSGRLR HSSPQEAFER AMEFYNQGKY
60 70 80 90 100
DRAIEYFKAV FTYGRTHEWA ADAQFYLARA YYQNKEYLLA ASEYERFIQI
110 120 130 140 150
YQIDPRVPQA EYERAMCYYK LSPPYELDQT DTRKAIEAFQ LFIDRYPNHE
160 170 180 190 200
LVDDATQKIR ELRAKLARKQ YEAARLYERR ELYEAAAVTY EAVFDAYPDT
210 220 230 240 250
PWADDALVGA MRAYIAYAEQ SVRARQPERY RRAVELYERL LQIFPDSPLL
260 270 280
RTAEELYTRA RQRLTELEGD ASLAQGQRQN
Length:280
Mass (Da):32,856
Last modified:December 15, 2009 - v1
Checksum:iAD437CC227B723AE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001807 Genomic DNA. Translation: ACY47577.1.
RefSeqiWP_012843189.1. NC_013501.1.

Genome annotation databases

EnsemblBacteriaiACY47577; ACY47577; Rmar_0679.
KEGGirmr:Rmar_0679.

Similar proteinsi

Entry informationi

Entry nameiD0MFQ0_RHOM4
AccessioniPrimary (citable) accession number: D0MFQ0
Entry historyiIntegrated into UniProtKB/TrEMBL: December 15, 2009
Last sequence update: December 15, 2009
Last modified: November 22, 2017
This is version 51 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported