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D0MDS5

- D0MDS5_RHOM4

UniProt

D0MDS5 - D0MDS5_RHOM4

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Protein
Submitted name: Isocitrate dehydrogenase
Gene
Rmar_2190
Organism
Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) (Rhodothermus obamensis)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. NAD binding Source: InterPro
  2. isocitrate dehydrogenase (NAD+) activity Source: UniProtKB-EC
  3. isocitrate dehydrogenase (NADP+) activity Source: InterPro
  4. magnesium ion binding Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. glyoxylate cycle Source: InterPro
  2. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotationImported

Enzyme and pathway databases

BioCyciRMAR518766:GJJ8-2234-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Isocitrate dehydrogenaseImported (EC:1.1.1.41Imported)
Gene namesi
Ordered Locus Names:Rmar_2190Imported
OrganismiRhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) (Rhodothermus obamensis)Imported
Taxonomic identifieri518766 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesBacteroidetes Order II. Incertae sedisRhodothermaceaeRhodothermus
ProteomesiUP000002221: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi518766.Rmar_2190.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0473.
HOGENOMiHOG000021113.
KOiK00031.
OrthoDBiEOG65XN31.

Family and domain databases

Gene3Di3.40.718.10. 1 hit.
InterProiIPR019818. IsoCit/isopropylmalate_DH_CS.
IPR001804. Isocitrate/isopropylmalate_DH.
IPR014273. Isocitrate_DH_aproteobac-typ.
IPR024084. IsoPropMal-DH-like_dom.
[Graphical view]
PANTHERiPTHR11835. PTHR11835. 1 hit.
PfamiPF00180. Iso_dh. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02924. ICDH_alpha. 1 hit.
PROSITEiPS00470. IDH_IMDH. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D0MDS5-1 [UniParc]FASTAAdd to Basket

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MSQPQEKYRV TIAYGDGIGP EIMRATLAVL EAAGAPLEYD VIEIGEKVYR    50
QGITSGIPDE AWEVLRRNRV FLKAPITTPQ GGGYKSLNVT IRKALGLFAN 100
IRPTKSLHPY VETPYPDIDL VIVRENEEDL YAAIEHRQTT EVVQALKLVT 150
RPGSEGIIRY AFEYARAYGR RKVTCMSKDN ILKLTDGLFH KIFEEIAAEY 200
PDIEAEHRII DIGAALVAAR PETLDVIVTL NLYGDILSDI AAQVAGSVGL 250
GGSANVGTHA AMFEAIHGSA PDIAGKDIAN PSGLLNAAVM MLVHLGLADI 300
AARIENAWLR TIEDGIHTAD IYRPGKSKKK VGTQAFAEAV IARLGQEPQH 350
LKPVHFRKPG VSVEIRPTPR QPKQLVGVDV FIDWDEAGRD PNVLGRKLEA 400
LAGEAFRLRV ITNRGVKVYP GGLPETFCTD HWRCRFVAAE EGGTVTPAQI 450
LELLRRIHEA GLEFIKTEHL YTFDGQRGFS LAQAE 485
Length:485
Mass (Da):53,293
Last modified:December 15, 2009 - v1
Checksum:i0BA4C6C2CA5D1E6E
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001807 Genomic DNA. Translation: ACY49069.1.
RefSeqiYP_003291457.1. NC_013501.1.

Genome annotation databases

EnsemblBacteriaiACY49069; ACY49069; Rmar_2190.
GeneIDi8568853.
KEGGirmr:Rmar_2190.
PATRICi32318507. VBIRhoMar93821_2212.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001807 Genomic DNA. Translation: ACY49069.1 .
RefSeqi YP_003291457.1. NC_013501.1.

3D structure databases

ModBasei Search...

Protein-protein interaction databases

STRINGi 518766.Rmar_2190.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACY49069 ; ACY49069 ; Rmar_2190 .
GeneIDi 8568853.
KEGGi rmr:Rmar_2190.
PATRICi 32318507. VBIRhoMar93821_2212.

Phylogenomic databases

eggNOGi COG0473.
HOGENOMi HOG000021113.
KOi K00031.
OrthoDBi EOG65XN31.

Enzyme and pathway databases

BioCyci RMAR518766:GJJ8-2234-MONOMER.

Family and domain databases

Gene3Di 3.40.718.10. 1 hit.
InterProi IPR019818. IsoCit/isopropylmalate_DH_CS.
IPR001804. Isocitrate/isopropylmalate_DH.
IPR014273. Isocitrate_DH_aproteobac-typ.
IPR024084. IsoPropMal-DH-like_dom.
[Graphical view ]
PANTHERi PTHR11835. PTHR11835. 1 hit.
Pfami PF00180. Iso_dh. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR02924. ICDH_alpha. 1 hit.
PROSITEi PS00470. IDH_IMDH. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 43812 / DSM 4252 / R-10.

Entry informationi

Entry nameiD0MDS5_RHOM4
AccessioniPrimary (citable) accession number: D0MDS5
Entry historyi
Integrated into UniProtKB/TrEMBL: December 15, 2009
Last sequence update: December 15, 2009
Last modified: April 16, 2014
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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