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D0MDS5

- D0MDS5_RHOM4

UniProt

D0MDS5 - D0MDS5_RHOM4

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Protein
Submitted name:

Isocitrate dehydrogenase

Gene

Rmar_2190

Organism
Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) (Rhodothermus obamensis)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. isocitrate dehydrogenase (NAD+) activity Source: UniProtKB-EC
  2. isocitrate dehydrogenase (NADP+) activity Source: InterPro
  3. magnesium ion binding Source: InterPro
  4. NAD binding Source: InterPro

GO - Biological processi

  1. glyoxylate cycle Source: InterPro
  2. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotationImported

Enzyme and pathway databases

BioCyciRMAR518766:GJJ8-2234-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Isocitrate dehydrogenaseImported (EC:1.1.1.41Imported)
Gene namesi
Ordered Locus Names:Rmar_2190Imported
OrganismiRhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) (Rhodothermus obamensis)Imported
Taxonomic identifieri518766 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesBacteroidetes Order II. Incertae sedisRhodothermaceaeRhodothermus
ProteomesiUP000002221: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi518766.Rmar_2190.

Family & Domainsi

Sequence similaritiesi

Belongs to the isocitrate and isopropylmalate dehydrogenases family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0473.
HOGENOMiHOG000021113.
KOiK00031.
OrthoDBiEOG65XN31.

Family and domain databases

Gene3Di3.40.718.10. 1 hit.
InterProiIPR019818. IsoCit/isopropylmalate_DH_CS.
IPR001804. Isocitrate/isopropylmalate_DH.
IPR014273. Isocitrate_DH_aproteobac-typ.
IPR024084. IsoPropMal-DH-like_dom.
[Graphical view]
PANTHERiPTHR11835. PTHR11835. 1 hit.
PfamiPF00180. Iso_dh. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02924. ICDH_alpha. 1 hit.
PROSITEiPS00470. IDH_IMDH. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D0MDS5-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSQPQEKYRV TIAYGDGIGP EIMRATLAVL EAAGAPLEYD VIEIGEKVYR
60 70 80 90 100
QGITSGIPDE AWEVLRRNRV FLKAPITTPQ GGGYKSLNVT IRKALGLFAN
110 120 130 140 150
IRPTKSLHPY VETPYPDIDL VIVRENEEDL YAAIEHRQTT EVVQALKLVT
160 170 180 190 200
RPGSEGIIRY AFEYARAYGR RKVTCMSKDN ILKLTDGLFH KIFEEIAAEY
210 220 230 240 250
PDIEAEHRII DIGAALVAAR PETLDVIVTL NLYGDILSDI AAQVAGSVGL
260 270 280 290 300
GGSANVGTHA AMFEAIHGSA PDIAGKDIAN PSGLLNAAVM MLVHLGLADI
310 320 330 340 350
AARIENAWLR TIEDGIHTAD IYRPGKSKKK VGTQAFAEAV IARLGQEPQH
360 370 380 390 400
LKPVHFRKPG VSVEIRPTPR QPKQLVGVDV FIDWDEAGRD PNVLGRKLEA
410 420 430 440 450
LAGEAFRLRV ITNRGVKVYP GGLPETFCTD HWRCRFVAAE EGGTVTPAQI
460 470 480
LELLRRIHEA GLEFIKTEHL YTFDGQRGFS LAQAE
Length:485
Mass (Da):53,293
Last modified:December 15, 2009 - v1
Checksum:i0BA4C6C2CA5D1E6E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001807 Genomic DNA. Translation: ACY49069.1.
RefSeqiYP_003291457.1. NC_013501.1.

Genome annotation databases

EnsemblBacteriaiACY49069; ACY49069; Rmar_2190.
GeneIDi8568853.
KEGGirmr:Rmar_2190.
PATRICi32318507. VBIRhoMar93821_2212.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001807 Genomic DNA. Translation: ACY49069.1 .
RefSeqi YP_003291457.1. NC_013501.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 518766.Rmar_2190.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACY49069 ; ACY49069 ; Rmar_2190 .
GeneIDi 8568853.
KEGGi rmr:Rmar_2190.
PATRICi 32318507. VBIRhoMar93821_2212.

Phylogenomic databases

eggNOGi COG0473.
HOGENOMi HOG000021113.
KOi K00031.
OrthoDBi EOG65XN31.

Enzyme and pathway databases

BioCyci RMAR518766:GJJ8-2234-MONOMER.

Family and domain databases

Gene3Di 3.40.718.10. 1 hit.
InterProi IPR019818. IsoCit/isopropylmalate_DH_CS.
IPR001804. Isocitrate/isopropylmalate_DH.
IPR014273. Isocitrate_DH_aproteobac-typ.
IPR024084. IsoPropMal-DH-like_dom.
[Graphical view ]
PANTHERi PTHR11835. PTHR11835. 1 hit.
Pfami PF00180. Iso_dh. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR02924. ICDH_alpha. 1 hit.
PROSITEi PS00470. IDH_IMDH. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 43812 / DSM 4252 / R-10Imported.

Entry informationi

Entry nameiD0MDS5_RHOM4
AccessioniPrimary (citable) accession number: D0MDS5
Entry historyi
Integrated into UniProtKB/TrEMBL: December 15, 2009
Last sequence update: December 15, 2009
Last modified: October 1, 2014
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3