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D0MDS5

- D0MDS5_RHOM4

UniProt

D0MDS5 - D0MDS5_RHOM4

Protein
Submitted name:

Isocitrate dehydrogenase

Gene

Rmar_2190

Organism
Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) (Rhodothermus obamensis)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 31 (01 Oct 2014)
      Sequence version 1 (15 Dec 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. isocitrate dehydrogenase (NAD+) activity Source: UniProtKB-EC
    2. isocitrate dehydrogenase (NADP+) activity Source: InterPro
    3. magnesium ion binding Source: InterPro
    4. NAD binding Source: InterPro

    GO - Biological processi

    1. glyoxylate cycle Source: InterPro
    2. tricarboxylic acid cycle Source: InterPro

    Keywords - Molecular functioni

    OxidoreductaseUniRule annotationImported

    Enzyme and pathway databases

    BioCyciRMAR518766:GJJ8-2234-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Isocitrate dehydrogenaseImported (EC:1.1.1.41Imported)
    Gene namesi
    Ordered Locus Names:Rmar_2190Imported
    OrganismiRhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) (Rhodothermus obamensis)Imported
    Taxonomic identifieri518766 [NCBI]
    Taxonomic lineageiBacteriaBacteroidetesBacteroidetes Order II. Incertae sedisRhodothermaceaeRhodothermus
    ProteomesiUP000002221: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi518766.Rmar_2190.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the isocitrate and isopropylmalate dehydrogenases family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0473.
    HOGENOMiHOG000021113.
    KOiK00031.
    OrthoDBiEOG65XN31.

    Family and domain databases

    Gene3Di3.40.718.10. 1 hit.
    InterProiIPR019818. IsoCit/isopropylmalate_DH_CS.
    IPR001804. Isocitrate/isopropylmalate_DH.
    IPR014273. Isocitrate_DH_aproteobac-typ.
    IPR024084. IsoPropMal-DH-like_dom.
    [Graphical view]
    PANTHERiPTHR11835. PTHR11835. 1 hit.
    PfamiPF00180. Iso_dh. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR02924. ICDH_alpha. 1 hit.
    PROSITEiPS00470. IDH_IMDH. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    D0MDS5-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSQPQEKYRV TIAYGDGIGP EIMRATLAVL EAAGAPLEYD VIEIGEKVYR    50
    QGITSGIPDE AWEVLRRNRV FLKAPITTPQ GGGYKSLNVT IRKALGLFAN 100
    IRPTKSLHPY VETPYPDIDL VIVRENEEDL YAAIEHRQTT EVVQALKLVT 150
    RPGSEGIIRY AFEYARAYGR RKVTCMSKDN ILKLTDGLFH KIFEEIAAEY 200
    PDIEAEHRII DIGAALVAAR PETLDVIVTL NLYGDILSDI AAQVAGSVGL 250
    GGSANVGTHA AMFEAIHGSA PDIAGKDIAN PSGLLNAAVM MLVHLGLADI 300
    AARIENAWLR TIEDGIHTAD IYRPGKSKKK VGTQAFAEAV IARLGQEPQH 350
    LKPVHFRKPG VSVEIRPTPR QPKQLVGVDV FIDWDEAGRD PNVLGRKLEA 400
    LAGEAFRLRV ITNRGVKVYP GGLPETFCTD HWRCRFVAAE EGGTVTPAQI 450
    LELLRRIHEA GLEFIKTEHL YTFDGQRGFS LAQAE 485
    Length:485
    Mass (Da):53,293
    Last modified:December 15, 2009 - v1
    Checksum:i0BA4C6C2CA5D1E6E
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001807 Genomic DNA. Translation: ACY49069.1.
    RefSeqiYP_003291457.1. NC_013501.1.

    Genome annotation databases

    EnsemblBacteriaiACY49069; ACY49069; Rmar_2190.
    GeneIDi8568853.
    KEGGirmr:Rmar_2190.
    PATRICi32318507. VBIRhoMar93821_2212.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001807 Genomic DNA. Translation: ACY49069.1 .
    RefSeqi YP_003291457.1. NC_013501.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 518766.Rmar_2190.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACY49069 ; ACY49069 ; Rmar_2190 .
    GeneIDi 8568853.
    KEGGi rmr:Rmar_2190.
    PATRICi 32318507. VBIRhoMar93821_2212.

    Phylogenomic databases

    eggNOGi COG0473.
    HOGENOMi HOG000021113.
    KOi K00031.
    OrthoDBi EOG65XN31.

    Enzyme and pathway databases

    BioCyci RMAR518766:GJJ8-2234-MONOMER.

    Family and domain databases

    Gene3Di 3.40.718.10. 1 hit.
    InterProi IPR019818. IsoCit/isopropylmalate_DH_CS.
    IPR001804. Isocitrate/isopropylmalate_DH.
    IPR014273. Isocitrate_DH_aproteobac-typ.
    IPR024084. IsoPropMal-DH-like_dom.
    [Graphical view ]
    PANTHERi PTHR11835. PTHR11835. 1 hit.
    Pfami PF00180. Iso_dh. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR02924. ICDH_alpha. 1 hit.
    PROSITEi PS00470. IDH_IMDH. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 43812 / DSM 4252 / R-10Imported.

    Entry informationi

    Entry nameiD0MDS5_RHOM4
    AccessioniPrimary (citable) accession number: D0MDS5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: December 15, 2009
    Last sequence update: December 15, 2009
    Last modified: October 1, 2014
    This is version 31 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3