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D0M6D1

- D0M6D1_VIBSE

UniProt

D0M6D1 - D0M6D1_VIBSE

Protein

Phosphoenolpyruvate carboxylase

Gene

ppc

Organism
Vibrio sp. (strain Ex25)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 34 (01 Oct 2014)
      Sequence version 1 (15 Dec 2009)
      Previous versions | rss
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    Functioni

    Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.UniRule annotationSAAS annotation

    Catalytic activityi

    Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.UniRule annotationSAAS annotation

    Cofactori

    Magnesium.UniRule annotationSAAS annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei138 – 1381UniRule annotation
    Active sitei544 – 5441UniRule annotation

    GO - Molecular functioni

    1. magnesium ion binding Source: UniProtKB-HAMAP
    2. phosphoenolpyruvate carboxylase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. carbon fixation Source: UniProtKB-HAMAP
    2. oxaloacetate metabolic process Source: UniProtKB-HAMAP
    3. tricarboxylic acid cycle Source: InterPro

    Keywords - Molecular functioni

    LyaseUniRule annotationSAAS annotationImported

    Keywords - Biological processi

    Carbon dioxide fixationUniRule annotationSAAS annotation

    Keywords - Ligandi

    MagnesiumUniRule annotationSAAS annotation, PyruvateImported

    Enzyme and pathway databases

    BioCyciVSP150340:GJJG-758-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Phosphoenolpyruvate carboxylaseUniRule annotation (EC:4.1.1.31UniRule annotation)
    Short name:
    PEPCUniRule annotation
    Short name:
    PEPCaseUniRule annotation
    Gene namesi
    Name:ppcUniRule annotation
    Ordered Locus Names:VEA_002310Imported
    OrganismiVibrio sp. (strain Ex25)Imported
    Taxonomic identifieri150340 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
    ProteomesiUP000002571: Chromosome 1

    Interactioni

    Subunit structurei

    Homotetramer.UniRule annotation

    Protein-protein interaction databases

    STRINGi150340.VEA_002310.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the PEPCase type 1 family.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000238648.
    KOiK01595.
    OMAiELSTISC.
    OrthoDBiEOG6TJ7T8.

    Family and domain databases

    HAMAPiMF_00595. PEPcase_type1.
    InterProiIPR021135. PEP_COase.
    IPR018129. PEP_COase_AS.
    IPR022805. PEP_COase_bac/pln-type.
    IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
    [Graphical view]
    PfamiPF00311. PEPcase. 1 hit.
    [Graphical view]
    PRINTSiPR00150. PEPCARBXLASE.
    SUPFAMiSSF51621. SSF51621. 1 hit.
    PROSITEiPS00781. PEPCASE_1. 1 hit.
    PS00393. PEPCASE_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    D0M6D1-1 [UniParc]FASTAAdd to Basket

    « Hide

    MNEKYAALKS NVRMLGHLLG NTIRDAHGEE IFEKVETIRK LSKSAQAGNQ    50
    ADRDSLIEEI KHLPDEQLTP VTRAFNQFLN LTNIAEQYHT ISRHCEEHIC 100
    EPDAINSLFS KLVQNDVSKL DTAQAVRDLN IELVLTAHPT EITRRTMINK 150
    LVKINECLSK LELSDLSSKE RKKTERRLEQ LIAQSWHSDV IRQQRPTPLD 200
    EAKWGFAVVE NSLWEAVPDF LREMHDRLKS YLGEGLPIDA RPVHFSSWMG 250
    GDRDGNPFVT HSVTREVLLL SRWKAADLYL NDINELISEL SMTVSNDQVR 300
    ELAGEDQHEP YRAILKQLRT LLNETKDILD AKIHGQKLAV KAPLQKVEQL 350
    WEPLYACYQS LNECGMGVIA NGSLLDTLRR VKAFGIHLVR LDIRQESTRH 400
    SDVLSELTRY LGIGDYEQWS EQDKIAFLTN ELASKRPLLP RDWEPSEPVK 450
    EVLDTCKIIA AQPREAFGAY VISMARTASD VLAVHLLLQE AGCPYRMDVC 500
    PLFETLDDLN NAESVIKQLM GIDLYRGFIQ NHQMVMIGYS DSAKDAGVMS 550
    AGWAQYHAME SLVKVAEEEG VELTLFHGRG GTVGRGGAPA HAALLSQPPK 600
    SLKGGLRVTE QGEMIRFKLG LPDVAVNSFN LYASAILEAN LLPPPEPKQE 650
    WRDLMEVLSE VSCESYRNVV RGEPDFVPYF RQATPELELG KLPLGSRPAK 700
    RNPKGGVESL RAIPWIFSWS QNRLVLPAWL GAGEAIQYSI DKGHQALLEE 750
    MCREWPFFST RLGMLEMVYS KCNIDISRYY DERLVDESLR PLGEKLRAQL 800
    QEDIKAVLNV ENNENLMQHD PWGLESIRLR NIYVEPLNML QAELLYRTRQ 850
    TEEASANLEE ALMVTIAGIA AGMRNTG 877
    Length:877
    Mass (Da):99,255
    Last modified:December 15, 2009 - v1
    Checksum:iB1149A59D4C58BD6
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001805 Genomic DNA. Translation: ACY50472.1.
    RefSeqiWP_012841346.1. NC_013456.1.
    YP_003284937.1. NC_013456.1.

    Genome annotation databases

    EnsemblBacteriaiACY50472; ACY50472; VEA_002310.
    GeneIDi8555995.
    KEGGivex:VEA_002310.
    PATRICi32534561. VBIVibSp203755_0701.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001805 Genomic DNA. Translation: ACY50472.1 .
    RefSeqi WP_012841346.1. NC_013456.1.
    YP_003284937.1. NC_013456.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 150340.VEA_002310.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACY50472 ; ACY50472 ; VEA_002310 .
    GeneIDi 8555995.
    KEGGi vex:VEA_002310.
    PATRICi 32534561. VBIVibSp203755_0701.

    Phylogenomic databases

    HOGENOMi HOG000238648.
    KOi K01595.
    OMAi ELSTISC.
    OrthoDBi EOG6TJ7T8.

    Enzyme and pathway databases

    BioCyci VSP150340:GJJG-758-MONOMER.

    Family and domain databases

    HAMAPi MF_00595. PEPcase_type1.
    InterProi IPR021135. PEP_COase.
    IPR018129. PEP_COase_AS.
    IPR022805. PEP_COase_bac/pln-type.
    IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
    [Graphical view ]
    Pfami PF00311. PEPcase. 1 hit.
    [Graphical view ]
    PRINTSi PR00150. PEPCARBXLASE.
    SUPFAMi SSF51621. SSF51621. 1 hit.
    PROSITEi PS00781. PEPCASE_1. 1 hit.
    PS00393. PEPCASE_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Sequence of the deep-sea isolate Vibrio sp. strain Ex25."
      Munk A.C., Tapia R., Green L., Rogers Y., Detter J.C., Bruce D., Brettin T.S., Colwell R., Huq A., Grim C.J., Hasan N.A., Vonstein V., Bartels D.
      Submitted (OCT-2009) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Ex25Imported.

    Entry informationi

    Entry nameiD0M6D1_VIBSE
    AccessioniPrimary (citable) accession number: D0M6D1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: December 15, 2009
    Last sequence update: December 15, 2009
    Last modified: October 1, 2014
    This is version 34 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3