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D0M6D1 (D0M6D1_VIBSE) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 26. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Phosphoenolpyruvate carboxylase HAMAP-Rule MF_00595
Short name=PEPC HAMAP-Rule MF_00595
Short name=PEPCase HAMAP-Rule MF_00595
EC=4.1.1.31 HAMAP-Rule MF_00595
Gene names
Name:ppc HAMAP-Rule MF_00595
Ordered Locus Names:VEA_002310
OrganismVibrio sp. (strain Ex25) [Complete proteome] [HAMAP] EMBL ACY50472.1
Taxonomic identifier150340 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Vibrionales › Vibrionaceae › Vibrio

Protein attributes

Sequence length877 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle By similarity. HAMAP-Rule MF_00595 SAAS SAAS022805

Catalytic activity

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-. HAMAP-Rule MF_00595 SAAS SAAS018129

Cofactor

Magnesium By similarity. HAMAP-Rule MF_00595 SAAS SAAS018129

Subunit structure

Homotetramer By similarity. HAMAP-Rule MF_00595

Sequence similarities

Belongs to the PEPCase type 1 family. HAMAP-Rule MF_00595

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site1381 By similarity HAMAP-Rule MF_00595
Active site5441 By similarity HAMAP-Rule MF_00595

Sequences

Sequence LengthMass (Da)Tools
D0M6D1 [UniParc].

Last modified December 15, 2009. Version 1.
Checksum: B1149A59D4C58BD6

FASTA87799,255
        10         20         30         40         50         60 
MNEKYAALKS NVRMLGHLLG NTIRDAHGEE IFEKVETIRK LSKSAQAGNQ ADRDSLIEEI 

        70         80         90        100        110        120 
KHLPDEQLTP VTRAFNQFLN LTNIAEQYHT ISRHCEEHIC EPDAINSLFS KLVQNDVSKL 

       130        140        150        160        170        180 
DTAQAVRDLN IELVLTAHPT EITRRTMINK LVKINECLSK LELSDLSSKE RKKTERRLEQ 

       190        200        210        220        230        240 
LIAQSWHSDV IRQQRPTPLD EAKWGFAVVE NSLWEAVPDF LREMHDRLKS YLGEGLPIDA 

       250        260        270        280        290        300 
RPVHFSSWMG GDRDGNPFVT HSVTREVLLL SRWKAADLYL NDINELISEL SMTVSNDQVR 

       310        320        330        340        350        360 
ELAGEDQHEP YRAILKQLRT LLNETKDILD AKIHGQKLAV KAPLQKVEQL WEPLYACYQS 

       370        380        390        400        410        420 
LNECGMGVIA NGSLLDTLRR VKAFGIHLVR LDIRQESTRH SDVLSELTRY LGIGDYEQWS 

       430        440        450        460        470        480 
EQDKIAFLTN ELASKRPLLP RDWEPSEPVK EVLDTCKIIA AQPREAFGAY VISMARTASD 

       490        500        510        520        530        540 
VLAVHLLLQE AGCPYRMDVC PLFETLDDLN NAESVIKQLM GIDLYRGFIQ NHQMVMIGYS 

       550        560        570        580        590        600 
DSAKDAGVMS AGWAQYHAME SLVKVAEEEG VELTLFHGRG GTVGRGGAPA HAALLSQPPK 

       610        620        630        640        650        660 
SLKGGLRVTE QGEMIRFKLG LPDVAVNSFN LYASAILEAN LLPPPEPKQE WRDLMEVLSE 

       670        680        690        700        710        720 
VSCESYRNVV RGEPDFVPYF RQATPELELG KLPLGSRPAK RNPKGGVESL RAIPWIFSWS 

       730        740        750        760        770        780 
QNRLVLPAWL GAGEAIQYSI DKGHQALLEE MCREWPFFST RLGMLEMVYS KCNIDISRYY 

       790        800        810        820        830        840 
DERLVDESLR PLGEKLRAQL QEDIKAVLNV ENNENLMQHD PWGLESIRLR NIYVEPLNML 

       850        860        870 
QAELLYRTRQ TEEASANLEE ALMVTIAGIA AGMRNTG

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References

[1]"Sequence of the deep-sea isolate Vibrio sp. strain Ex25."
Munk A.C., Tapia R., Green L., Rogers Y., Detter J.C., Bruce D., Brettin T.S., Colwell R., Huq A., Grim C.J., Hasan N.A., Vonstein V., Bartels D.
Submitted (OCT-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Ex25.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001805 Genomic DNA. Translation: ACY50472.1.
RefSeqYP_003284937.1. NC_013456.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRING150340.VEA_002310.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACY50472; ACY50472; VEA_002310.
GeneID8555995.
KEGGvex:VEA_002310.
PATRIC32534561. VBIVibSp203755_0701.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000238648.
KOK01595.

Family and domain databases

HAMAPMF_00595. PEPcase_type1.
InterProIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase.
[Graphical view]
PfamPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSPR00150. PEPCARBXLASE.
SUPFAMSSF51621. Pyrv/PenolPyrv_Kinase_cat. 1 hit.
PROSITEPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD0M6D1_VIBSE
AccessionPrimary (citable) accession number: D0M6D1
Entry history
Integrated into UniProtKB/TrEMBL: December 15, 2009
Last sequence update: December 15, 2009
Last modified: May 1, 2013
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info