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D0M6D1

- D0M6D1_VIBSE

UniProt

D0M6D1 - D0M6D1_VIBSE

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Protein
Phosphoenolpyruvate carboxylase
Gene
ppc, VEA_002310
Organism
Vibrio sp. (strain Ex25)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle By similarity.UniRule annotationSAAS annotations

Catalytic activityi

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.UniRule annotationSAAS annotations

Cofactori

Magnesium By similarity.UniRule annotationSAAS annotations

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei138 – 1381 By similarityUniRule annotation
Active sitei544 – 5441 By similarityUniRule annotation

GO - Molecular functioni

  1. magnesium ion binding Source: UniProtKB-HAMAP
  2. phosphoenolpyruvate carboxylase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. carbon fixation Source: UniProtKB-HAMAP
  2. oxaloacetate metabolic process Source: UniProtKB-HAMAP
  3. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotationSAAS annotationsImported

Keywords - Biological processi

Carbon dioxide fixationUniRule annotationSAAS annotations

Keywords - Ligandi

MagnesiumUniRule annotationSAAS annotations, PyruvateImported

Enzyme and pathway databases

BioCyciVSP150340:GJJG-758-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Phosphoenolpyruvate carboxylaseUniRule annotation (EC:4.1.1.31UniRule annotation)
Short name:
PEPCUniRule annotation
Short name:
PEPCaseUniRule annotation
Gene namesi
Name:ppcUniRule annotation
Ordered Locus Names:VEA_002310Imported
OrganismiVibrio sp. (strain Ex25)Imported
Taxonomic identifieri150340 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
ProteomesiUP000002571: Chromosome 1

Interactioni

Subunit structurei

Homotetramer By similarity.UniRule annotation

Protein-protein interaction databases

STRINGi150340.VEA_002310.

Family & Domainsi

Sequence similaritiesi

Belongs to the PEPCase type 1 family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000238648.
KOiK01595.
OMAiELSTISC.
OrthoDBiEOG6TJ7T8.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D0M6D1-1 [UniParc]FASTAAdd to Basket

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MNEKYAALKS NVRMLGHLLG NTIRDAHGEE IFEKVETIRK LSKSAQAGNQ    50
ADRDSLIEEI KHLPDEQLTP VTRAFNQFLN LTNIAEQYHT ISRHCEEHIC 100
EPDAINSLFS KLVQNDVSKL DTAQAVRDLN IELVLTAHPT EITRRTMINK 150
LVKINECLSK LELSDLSSKE RKKTERRLEQ LIAQSWHSDV IRQQRPTPLD 200
EAKWGFAVVE NSLWEAVPDF LREMHDRLKS YLGEGLPIDA RPVHFSSWMG 250
GDRDGNPFVT HSVTREVLLL SRWKAADLYL NDINELISEL SMTVSNDQVR 300
ELAGEDQHEP YRAILKQLRT LLNETKDILD AKIHGQKLAV KAPLQKVEQL 350
WEPLYACYQS LNECGMGVIA NGSLLDTLRR VKAFGIHLVR LDIRQESTRH 400
SDVLSELTRY LGIGDYEQWS EQDKIAFLTN ELASKRPLLP RDWEPSEPVK 450
EVLDTCKIIA AQPREAFGAY VISMARTASD VLAVHLLLQE AGCPYRMDVC 500
PLFETLDDLN NAESVIKQLM GIDLYRGFIQ NHQMVMIGYS DSAKDAGVMS 550
AGWAQYHAME SLVKVAEEEG VELTLFHGRG GTVGRGGAPA HAALLSQPPK 600
SLKGGLRVTE QGEMIRFKLG LPDVAVNSFN LYASAILEAN LLPPPEPKQE 650
WRDLMEVLSE VSCESYRNVV RGEPDFVPYF RQATPELELG KLPLGSRPAK 700
RNPKGGVESL RAIPWIFSWS QNRLVLPAWL GAGEAIQYSI DKGHQALLEE 750
MCREWPFFST RLGMLEMVYS KCNIDISRYY DERLVDESLR PLGEKLRAQL 800
QEDIKAVLNV ENNENLMQHD PWGLESIRLR NIYVEPLNML QAELLYRTRQ 850
TEEASANLEE ALMVTIAGIA AGMRNTG 877
Length:877
Mass (Da):99,255
Last modified:December 15, 2009 - v1
Checksum:iB1149A59D4C58BD6
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001805 Genomic DNA. Translation: ACY50472.1.
RefSeqiWP_012841346.1. NC_013456.1.
YP_003284937.1. NC_013456.1.

Genome annotation databases

EnsemblBacteriaiACY50472; ACY50472; VEA_002310.
GeneIDi8555995.
KEGGivex:VEA_002310.
PATRICi32534561. VBIVibSp203755_0701.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001805 Genomic DNA. Translation: ACY50472.1 .
RefSeqi WP_012841346.1. NC_013456.1.
YP_003284937.1. NC_013456.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 150340.VEA_002310.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACY50472 ; ACY50472 ; VEA_002310 .
GeneIDi 8555995.
KEGGi vex:VEA_002310.
PATRICi 32534561. VBIVibSp203755_0701.

Phylogenomic databases

HOGENOMi HOG000238648.
KOi K01595.
OMAi ELSTISC.
OrthoDBi EOG6TJ7T8.

Enzyme and pathway databases

BioCyci VSP150340:GJJG-758-MONOMER.

Family and domain databases

HAMAPi MF_00595. PEPcase_type1.
InterProi IPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view ]
Pfami PF00311. PEPcase. 1 hit.
[Graphical view ]
PRINTSi PR00150. PEPCARBXLASE.
SUPFAMi SSF51621. SSF51621. 1 hit.
PROSITEi PS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Sequence of the deep-sea isolate Vibrio sp. strain Ex25."
    Munk A.C., Tapia R., Green L., Rogers Y., Detter J.C., Bruce D., Brettin T.S., Colwell R., Huq A., Grim C.J., Hasan N.A., Vonstein V., Bartels D.
    Submitted (OCT-2009) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Ex25.

Entry informationi

Entry nameiD0M6D1_VIBSE
AccessioniPrimary (citable) accession number: D0M6D1
Entry historyi
Integrated into UniProtKB/TrEMBL: December 15, 2009
Last sequence update: December 15, 2009
Last modified: September 3, 2014
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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