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D0M5C4

- D0M5C4_VIBSE

UniProt

D0M5C4 - D0M5C4_VIBSE

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Protein
Submitted name: Aspartate/tyrosine/aromatic aminotransferase
Gene
VEA_004034
Organism
Vibrio sp. (strain Ex25)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. pyridoxal phosphate binding Source: InterPro
  2. transaminase activity Source: UniProtKB-KW

GO - Biological processi

  1. biosynthetic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

AminotransferaseImported, Transferase

Enzyme and pathway databases

BioCyciVSP150340:GJJG-2536-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Aspartate/tyrosine/aromatic aminotransferaseImported
Gene namesi
Ordered Locus Names:VEA_004034Imported
OrganismiVibrio sp. (strain Ex25)Imported
Taxonomic identifieri150340 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
ProteomesiUP000002571: Chromosome 1

Interactioni

Protein-protein interaction databases

STRINGi150340.VEA_004034.

Structurei

3D structure databases

ProteinModelPortaliD0M5C4.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000223042.
KOiK14260.
OMAiYQARDMR.
OrthoDBiEOG6X9MJ6.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004839. Aminotransferase_I/II.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.

Sequencei

Sequence statusi: Complete.

D0M5C4-1 [UniParc]FASTAAdd to Basket

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MEEEGHKILK LNIGNPAPFG FDAPDEILVD VIRNLPTSQG YCDSKGIYSA    50
RKAVVQHYQR KGIRSLDVED VYVGNGVSEL IVMAMQALLN NGDEMLIPAP 100
DYPLWTASVA LSGGKPVHYL CDEGADWYPD LEDIKKKITP KTRGIVLINP 150
NNPTGAVYSR DFLLEVIEIA RQHKLIIFAD EIYDKVLYDG ATHTSVATLT 200
EDVLVMTFNG LSKAYRVCGF RGGWMFLTGP KHLAQGYVNG LELLSSMRLC 250
ANVPMQHAIQ TALGGYQSIN ELILPGGRLL EQRNRAYELI NQIPGVSCVK 300
PKGAMYLFPK IDTKMYNIKN DQQMVLDFLK QEKVLLVQGS GFNWPKPDHF 350
RIVTLPHVED LEIAIGRFER FLSTYSQ 377
Length:377
Mass (Da):42,220
Last modified:December 15, 2009 - v1
Checksum:i11748C7129D3E4D9
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001805 Genomic DNA. Translation: ACY52194.1.
RefSeqiWP_012842019.1. NC_013456.1.
YP_003286659.1. NC_013456.1.

Genome annotation databases

EnsemblBacteriaiACY52194; ACY52194; VEA_004034.
GeneIDi8557773.
KEGGivex:VEA_004034.
PATRICi32538129. VBIVibSp203755_2430.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001805 Genomic DNA. Translation: ACY52194.1 .
RefSeqi WP_012842019.1. NC_013456.1.
YP_003286659.1. NC_013456.1.

3D structure databases

ProteinModelPortali D0M5C4.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 150340.VEA_004034.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACY52194 ; ACY52194 ; VEA_004034 .
GeneIDi 8557773.
KEGGi vex:VEA_004034.
PATRICi 32538129. VBIVibSp203755_2430.

Phylogenomic databases

HOGENOMi HOG000223042.
KOi K14260.
OMAi YQARDMR.
OrthoDBi EOG6X9MJ6.

Enzyme and pathway databases

BioCyci VSP150340:GJJG-2536-MONOMER.

Family and domain databases

Gene3Di 3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProi IPR004839. Aminotransferase_I/II.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view ]
Pfami PF00155. Aminotran_1_2. 1 hit.
[Graphical view ]
SUPFAMi SSF53383. SSF53383. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Sequence of the deep-sea isolate Vibrio sp. strain Ex25."
    Munk A.C., Tapia R., Green L., Rogers Y., Detter J.C., Bruce D., Brettin T.S., Colwell R., Huq A., Grim C.J., Hasan N.A., Vonstein V., Bartels D.
    Submitted (OCT-2009) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Ex25.

Entry informationi

Entry nameiD0M5C4_VIBSE
AccessioniPrimary (citable) accession number: D0M5C4
Entry historyi
Integrated into UniProtKB/TrEMBL: December 15, 2009
Last sequence update: December 15, 2009
Last modified: September 3, 2014
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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