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D0M5C4

- D0M5C4_VIBSE

UniProt

D0M5C4 - D0M5C4_VIBSE

Protein
Submitted name:

Aspartate/tyrosine/aromatic aminotransferase

Gene

VEA_004034

Organism
Vibrio sp. (strain Ex25)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 26 (01 Oct 2014)
      Sequence version 1 (15 Dec 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. pyridoxal phosphate binding Source: InterPro
    2. transaminase activity Source: UniProtKB-KW

    GO - Biological processi

    1. biosynthetic process Source: InterPro

    Keywords - Molecular functioni

    AminotransferaseImported, Transferase

    Enzyme and pathway databases

    BioCyciVSP150340:GJJG-2536-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Aspartate/tyrosine/aromatic aminotransferaseImported
    Gene namesi
    Ordered Locus Names:VEA_004034Imported
    OrganismiVibrio sp. (strain Ex25)Imported
    Taxonomic identifieri150340 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
    ProteomesiUP000002571: Chromosome 1

    Interactioni

    Protein-protein interaction databases

    STRINGi150340.VEA_004034.

    Structurei

    3D structure databases

    ProteinModelPortaliD0M5C4.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000223042.
    KOiK14260.
    OMAiYQARDMR.
    OrthoDBiEOG6X9MJ6.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProiIPR004839. Aminotransferase_I/II.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view]
    PfamiPF00155. Aminotran_1_2. 1 hit.
    [Graphical view]
    SUPFAMiSSF53383. SSF53383. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    D0M5C4-1 [UniParc]FASTAAdd to Basket

    « Hide

    MEEEGHKILK LNIGNPAPFG FDAPDEILVD VIRNLPTSQG YCDSKGIYSA    50
    RKAVVQHYQR KGIRSLDVED VYVGNGVSEL IVMAMQALLN NGDEMLIPAP 100
    DYPLWTASVA LSGGKPVHYL CDEGADWYPD LEDIKKKITP KTRGIVLINP 150
    NNPTGAVYSR DFLLEVIEIA RQHKLIIFAD EIYDKVLYDG ATHTSVATLT 200
    EDVLVMTFNG LSKAYRVCGF RGGWMFLTGP KHLAQGYVNG LELLSSMRLC 250
    ANVPMQHAIQ TALGGYQSIN ELILPGGRLL EQRNRAYELI NQIPGVSCVK 300
    PKGAMYLFPK IDTKMYNIKN DQQMVLDFLK QEKVLLVQGS GFNWPKPDHF 350
    RIVTLPHVED LEIAIGRFER FLSTYSQ 377
    Length:377
    Mass (Da):42,220
    Last modified:December 15, 2009 - v1
    Checksum:i11748C7129D3E4D9
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001805 Genomic DNA. Translation: ACY52194.1.
    RefSeqiWP_012842019.1. NC_013456.1.
    YP_003286659.1. NC_013456.1.

    Genome annotation databases

    EnsemblBacteriaiACY52194; ACY52194; VEA_004034.
    GeneIDi8557773.
    KEGGivex:VEA_004034.
    PATRICi32538129. VBIVibSp203755_2430.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001805 Genomic DNA. Translation: ACY52194.1 .
    RefSeqi WP_012842019.1. NC_013456.1.
    YP_003286659.1. NC_013456.1.

    3D structure databases

    ProteinModelPortali D0M5C4.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 150340.VEA_004034.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACY52194 ; ACY52194 ; VEA_004034 .
    GeneIDi 8557773.
    KEGGi vex:VEA_004034.
    PATRICi 32538129. VBIVibSp203755_2430.

    Phylogenomic databases

    HOGENOMi HOG000223042.
    KOi K14260.
    OMAi YQARDMR.
    OrthoDBi EOG6X9MJ6.

    Enzyme and pathway databases

    BioCyci VSP150340:GJJG-2536-MONOMER.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProi IPR004839. Aminotransferase_I/II.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view ]
    Pfami PF00155. Aminotran_1_2. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53383. SSF53383. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Sequence of the deep-sea isolate Vibrio sp. strain Ex25."
      Munk A.C., Tapia R., Green L., Rogers Y., Detter J.C., Bruce D., Brettin T.S., Colwell R., Huq A., Grim C.J., Hasan N.A., Vonstein V., Bartels D.
      Submitted (OCT-2009) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Ex25Imported.

    Entry informationi

    Entry nameiD0M5C4_VIBSE
    AccessioniPrimary (citable) accession number: D0M5C4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: December 15, 2009
    Last sequence update: December 15, 2009
    Last modified: October 1, 2014
    This is version 26 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3