SubmitCancel

Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

D0M4D7

- D0M4D7_VIBSE

UniProt

D0M4D7 - D0M4D7_VIBSE

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Submitted name: Periplasmic alpha-amylase
Gene
VEA_002001
Organism
Vibrio sp. (strain Ex25)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. alpha-amylase activity Source: UniProtKB-EC
  2. calcium ion binding Source: InterPro

GO - Biological processi

  1. alpha-glucan catabolic process Source: InterPro
  2. cellular oligosaccharide catabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseImported, Hydrolase

Enzyme and pathway databases

BioCyciVSP150340:GJJG-404-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Periplasmic alpha-amylaseImported (EC:3.2.1.1Imported)
Gene namesi
Ordered Locus Names:VEA_002001Imported
OrganismiVibrio sp. (strain Ex25)Imported
Taxonomic identifieri150340 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
ProteomesiUP000002571: Chromosome 1

Subcellular locationi

GO - Cellular componenti

  1. periplasmic space Source: InterPro
Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi150340.VEA_002001.

Structurei

3D structure databases

ProteinModelPortaliD0M4D7.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000273912.
KOiK01176.
OMAiGQNWHSF.
OrthoDBiEOG65QWH3.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF036917. Alph_amls_MalS. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

D0M4D7-1 [UniParc]FASTAAdd to Basket

« Hide

MKKTILALSI GLLSACSQIP ENAIVLSVGD DTAVFEANSN GLLVAEQKLE    50
KGSYTFTIAD SNQTCGSSFA LAEEDRIKFN RPLKMDNCAT DAQMPLRIFK 100
ANTYQFTLNP TTNELTVRLK PKQNQDITYS CPVATDAPKT INVEQTFNDG 150
TVVRDALTGQ QATVANGSVT MQPGPMSQGL LLLEEVEQQA EKPFSWDNAT 200
VYFVMTDRFY NGNPDNDNSY GRSKDGKYEI GTFHGGDLAG LTKKLDYIES 250
LGVNAIWITS PLEQIHGWVG GGDKGDFKHY GYHGYYHQDW TKLDANMGSE 300
DELRTFVDTA HKKGIRVIWD VVMNHTGYAT LADMQEFGFG QLYLDDQEAK 350
EVLGEKWTDW QPKSGQSWHS FNDYIKYSDS EAWDKWWGKG WIRTDIGDYD 400
APGYNDITMS LNYLPDLKTE STQKTGLPNF FRNKDTNAQD ELQTPREHLI 450
TWLSDWVRDY GIDGFRVDTA KHVEMEAWAE LKASTTQALA QWKQNNPDKA 500
LDDLPFWMTG EVWAHSVVKS PYFDNGFDSI INFEFQSDVA PKALKCFAQL 550
DSDYRRYAER INSDPEFNVL SYLSSHDTQL FWSARSRSFD DQARAANALM 600
LAPGAVQIYY GDEIARDFGV TGSDPTQGTR SDMPWDKIHG EREDLLQHWQ 650
KLGEFRQRHP AVAQGKHITR NQEGYYAFER QYHDDKVLIV YTGE 694
Length:694
Mass (Da):78,779
Last modified:December 15, 2009 - v1
Checksum:iC7426E17E3D8F91C
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001805 Genomic DNA. Translation: ACY50164.1.
RefSeqiWP_012841259.1. NC_013456.1.
YP_003284629.1. NC_013456.1.

Genome annotation databases

EnsemblBacteriaiACY50164; ACY50164; VEA_002001.
GeneIDi8555641.
KEGGivex:VEA_002001.
PATRICi32533851. VBIVibSp203755_0391.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001805 Genomic DNA. Translation: ACY50164.1 .
RefSeqi WP_012841259.1. NC_013456.1.
YP_003284629.1. NC_013456.1.

3D structure databases

ProteinModelPortali D0M4D7.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 150340.VEA_002001.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACY50164 ; ACY50164 ; VEA_002001 .
GeneIDi 8555641.
KEGGi vex:VEA_002001.
PATRICi 32533851. VBIVibSp203755_0391.

Phylogenomic databases

eggNOGi COG0366.
HOGENOMi HOG000273912.
KOi K01176.
OMAi GQNWHSF.
OrthoDBi EOG65QWH3.

Enzyme and pathway databases

BioCyci VSP150340:GJJG-404-MONOMER.

Family and domain databases

Gene3Di 3.20.20.80. 1 hit.
InterProi IPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
[Graphical view ]
PIRSFi PIRSF036917. Alph_amls_MalS. 1 hit.
SMARTi SM00642. Aamy. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Sequence of the deep-sea isolate Vibrio sp. strain Ex25."
    Munk A.C., Tapia R., Green L., Rogers Y., Detter J.C., Bruce D., Brettin T.S., Colwell R., Huq A., Grim C.J., Hasan N.A., Vonstein V., Bartels D.
    Submitted (OCT-2009) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Ex25.

Entry informationi

Entry nameiD0M4D7_VIBSE
AccessioniPrimary (citable) accession number: D0M4D7
Entry historyi
Integrated into UniProtKB/TrEMBL: December 15, 2009
Last sequence update: December 15, 2009
Last modified: September 3, 2014
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

Similar proteinsi