D0LXI8 (D0LXI8_HALO1) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Short-chain dehydrogenase/reductase SDR EMBL ACY17743.1

Gene names

Ordered Locus Names:

Hoch_5258

Organism

Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) [Complete proteome] [HAMAP]

Taxonomic identifier

502025 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › delta/epsilon subdivisions › Deltaproteobacteria › Myxococcales › Nannocystineae › Kofleriaceae › Haliangium › Haliangium ochraceum

Protein attributes

Sequence length	272 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	oxidation-reduction process Inferred from electronic annotation. Source: GOC
Molecular_function	nucleotide binding Inferred from electronic annotation. Source: InterPro oxidoreductase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D0LXI8 [UniParc]. Last modified December 15, 2009. Version 1. Checksum: 908C124B36A92D8D	FASTA	272	29,301
	10 20 30 40 50 60 MSLKGKTLFI TGASRGIGKA IALRAARDGA NIAIAAKTAE PHPKLPGTVY SAAEEIEAAG 70 80 90 100 110 120 GKALPCIVDV RSEEQVKEAV AKTAETFGGI DILVNNASAI FLANIRNTPM KRYDLMHQIN 130 140 150 160 170 180 ARGTYLCSQA CVPFLEKSEN PHILMMSPPL NMEQRWFAPH VAYTMAKYGM SMCVLGLSGD 190 200 210 220 230 240 LAKSGIAVNA LWPKTTIATA AVRNLLGGEN TVRGSRTPEI VADAAHWIFN QNSREITGQF 250 260 270 FVDEEVLRKS GVTDFDGYAV DPSADLLPDF FL

References

[1]

"Complete genome sequence of Haliangium ochraceum type strain (SMP-2)." US DOE Joint Genome Institute (JGI-PGF) Ivanova N., Daum C., Lang E., Abt B., Kopitz M., Saunders E., Lapidus A., Lucas S., Glavina Del Rio T., Nolan M., Tice H., Copeland A., Cheng J.F., Chen F., Bruce D., Goodwin L., Pitluck S., Mavromatis K. , Pati A., Mikhailova N., Chen A., Palaniappan K., Land M., Hauser L., Chang Y.J., Jeffries C.D., Detter J.C., Brettin T., Rohde M., Goker M., Bristow J., Markowitz V., Eisen J.A., Hugenholtz P., Kyrpides N.C., Klenk H.P. Stand. Genomic Sci. 2:96-106(2010) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 14365 / JCM 11303 / SMP-2.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001804 Genomic DNA. Translation: ACY17743.1.
RefSeq	YP_003269636.1. NC_013440.1.
3D structure databases
ProteinModelPortal	D0LXI8.
ModBase	Search...
Protein-protein interaction databases
STRING	502025.Hoch_5258.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACY17743; ACY17743; Hoch_5258.
GeneID	8547670.
KEGG	hoh:Hoch_5258.
PATRIC	32200411. VBIHalOch22000_5324.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1028.
KO	K13775.
Enzyme and pathway databases
BioCyc	HOCH502025:GI43-5300-MONOMER.
Family and domain databases
Gene3D	3.40.50.720. 1 hit.
InterPro	IPR002198. DH_sc/Rdtase_SDR. IPR002347. Glc/ribitol_DH. IPR016040. NAD(P)-bd_dom. [Graphical view]
Pfam	PF00106. adh_short. 1 hit. [Graphical view]
PRINTS	PR00081. GDHRDH.
ProtoNet	Search...

Entry information

Entry name

D0LXI8_HALO1

Accession

Primary (citable) accession number: D0LXI8

Entry history

Integrated into UniProtKB/TrEMBL:	December 15, 2009
Last sequence update:	December 15, 2009
Last modified:	May 1, 2013
This is version 21 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)