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D0LWP4 (D0LWP4_HALO1) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 20. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Type I topoisomerase EMBL ACY17694.1
Gene names
Ordered Locus Names:Hoch_5208
OrganismHaliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) [Complete proteome] [HAMAP]
Taxonomic identifier502025 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Deltaproteobacteria › Myxococcales › Nannocystineae › Kofleriaceae › Haliangium ›

Protein attributes

Sequence length333 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionIsomerase EMBL ACY17694.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA topological change

Inferred from electronic annotation. Source: InterPro

   Cellular_componentchromosome

Inferred from electronic annotation. Source: InterPro

   Molecular_functionDNA topoisomerase type I activity

Inferred from electronic annotation. Source: InterPro

DNA topoisomerase type II (ATP-hydrolyzing) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D0LWP4 [UniParc].

Last modified December 15, 2009. Version 1.
Checksum: 27E306EADD4363A3

FASTA33338,203
        10         20         30         40         50         60 
MTSRTEMLRE EYLHRTGHKP DEFAYFWPDG RPYKNQRGLK RIASLAIPPA YTDVYVSPDA 

        70         80         90        100        110        120 
DADLQGFGRD SAGRLQYRYH PDFVQERAMK KWQRLARFAA ALPEYKHLST SDLRRSGLCD 

       130        140        150        160        170        180 
RKVMALMTRL LYMAYFRVGS KRYTKKHRSY GLTTLRQNHV KISGQRVVFD FRGKHGVPQH 

       190        200        210        220        230        240 
HEVSDRTVAG NLGKLKDLPG PWLFQAVDDG QRYRILARDL NGYVRDIMGP FSAKDFRTWG 

       250        260        270        280        290        300 
GTLTAAEYLA EVGPVDDEAQ TRKNIVACVK SVSTELGNTP AVVRQHYICP VIFDLYRDGK 

       310        320        330 
VLDDFEPRAS RNKSSDALSR SEQALKRMLE APH

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001804 Genomic DNA. Translation: ACY17694.1.
RefSeqYP_003269587.1. NC_013440.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRING502025.Hoch_5208.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACY17694; ACY17694; Hoch_5208.
GeneID8547620.
KEGGhoh:Hoch_5208.
PATRIC32200307. VBIHalOch22000_5272.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3569.
HOGENOMHOG000249262.
KOK03168.

Enzyme and pathway databases

BioCycHOCH502025:GI43-5250-MONOMER.

Family and domain databases

Gene3D3.90.15.10. 1 hit.
InterProIPR011010. DNA_brk_join_enz.
IPR001631. TopoI.
IPR014711. TopoI_cat_a-hlx-sub_euk.
IPR013500. TopoI_cat_euk.
[Graphical view]
PfamPF01028. Topoisom_I. 1 hit.
[Graphical view]
PRINTSPR00416. EUTPISMRASEI.
SUPFAMSSF56349. DNA_brk_join_enz. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD0LWP4_HALO1
AccessionPrimary (citable) accession number: D0LWP4
Entry history
Integrated into UniProtKB/TrEMBL: December 15, 2009
Last sequence update: December 15, 2009
Last modified: May 1, 2013
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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