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D0LWJ4

- D0LWJ4_HALO1

UniProt

D0LWJ4 - D0LWJ4_HALO1

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Protein
Submitted name:

Alpha amylase catalytic region

Gene
Hoch_5156
Organism
Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. catalytic activity Source: InterPro
  2. cation binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciHOCH502025:GI43-5197-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha amylase catalytic regionImported
Gene namesi
Ordered Locus Names:Hoch_5156Imported
OrganismiHaliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2)Imported
Taxonomic identifieri502025 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaMyxococcalesNannocystineaeKofleriaceaeHaliangium
ProteomesiUP000001880: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi502025.Hoch_5156.

Structurei

3D structure databases

ProteinModelPortaliD0LWJ4.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000273912.
KOiK01176.
OrthoDBiEOG65QWH3.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.

Sequencei

Sequence statusi: Complete.

D0LWJ4-1 [UniParc]FASTAAdd to Basket

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MNATKGTTMQ SPHLLRPGHR AASMYPPARP VSAPATRARS PRLTRAAAAL    50
LALLGLGACG GAPATQQPSE PGEPPVASEP DARPGSFADN PLVYFVITDR 100
FFDGNAENNH SYGRKGDGGD EIGTFHGGDL AGLTTKLEEG YFRALGVNAI 150
WITAPYEQIR GWVVGGDKAF QHYSYHGYYT LDYTVLDQNM GTPDELRRFV 200
DTAHEQDIRV IFDVVMNHPG YADLQTLDAF DIEVLWEGWE SATLSDYHSY 250
IDYNNFAFTE WWGPDWIRAG LPGYQEGNST DDLTMQLAYL PDFKTESEQP 300
VGLPPFLTRK ADTKAVAVDG YTVRDYLVAW LSAWVREYGI DGFRCDTAKH 350
VELAAWSELK QAGTEALAAW KQDNPGKAID DAPFWMTGEV FPHGVVRDAY 400
FDQGGFDNLI NFDFQNQLGD ILRGPASERW QRLDDLYADY AAQISDDASF 450
NVLSYISSHD TKLFDREALV AAGTALLLAP GGVQIFYGDE SARPLGPSVS 500
SDPQQNTRSD MNWDALADDV LAHWQTLGRF RRRHVALAKG THQKLGDAPY 550
VFARSRDDDA VVVALLGQLG EAGADASETV RVPVGDVFPV GTRLRDAATG 600
APLEVETDAS GGAVALTPGA SGVVLLERVA P 631
Length:631
Mass (Da):68,863
Last modified:December 15, 2009 - v1
Checksum:i6E518BDF11F5B7F9
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001804 Genomic DNA. Translation: ACY17644.1.
RefSeqiWP_012830236.1. NC_013440.1.
YP_003269537.1. NC_013440.1.

Genome annotation databases

EnsemblBacteriaiACY17644; ACY17644; Hoch_5156.
GeneIDi8547567.
KEGGihoh:Hoch_5156.
PATRICi32200201. VBIHalOch22000_5220.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001804 Genomic DNA. Translation: ACY17644.1 .
RefSeqi WP_012830236.1. NC_013440.1.
YP_003269537.1. NC_013440.1.

3D structure databases

ProteinModelPortali D0LWJ4.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 502025.Hoch_5156.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACY17644 ; ACY17644 ; Hoch_5156 .
GeneIDi 8547567.
KEGGi hoh:Hoch_5156.
PATRICi 32200201. VBIHalOch22000_5220.

Phylogenomic databases

eggNOGi COG0366.
HOGENOMi HOG000273912.
KOi K01176.
OrthoDBi EOG65QWH3.

Enzyme and pathway databases

BioCyci HOCH502025:GI43-5197-MONOMER.

Family and domain databases

Gene3Di 3.20.20.80. 1 hit.
InterProi IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
[Graphical view ]
SMARTi SM00642. Aamy. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 2 hits.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 14365 / JCM 11303 / SMP-2.

Entry informationi

Entry nameiD0LWJ4_HALO1
AccessioniPrimary (citable) accession number: D0LWJ4
Entry historyi
Integrated into UniProtKB/TrEMBL: December 15, 2009
Last sequence update: December 15, 2009
Last modified: September 3, 2014
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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