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D0LWJ4 (D0LWJ4_HALO1) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 24. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Hoch_5156 EMBL ACY17644.1
OrganismHaliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) [Complete proteome] [HAMAP] EMBL ACY17644.1
Taxonomic identifier502025 [NCBI]
Taxonomic lineageBacteriaProteobacteriaDeltaproteobacteriaMyxococcalesNannocystineaeKofleriaceaeHaliangium

Protein attributes

Sequence length631 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

cation binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D0LWJ4 [UniParc].

Last modified December 15, 2009. Version 1.
Checksum: 6E518BDF11F5B7F9

FASTA63168,863
        10         20         30         40         50         60 
MNATKGTTMQ SPHLLRPGHR AASMYPPARP VSAPATRARS PRLTRAAAAL LALLGLGACG 

        70         80         90        100        110        120 
GAPATQQPSE PGEPPVASEP DARPGSFADN PLVYFVITDR FFDGNAENNH SYGRKGDGGD 

       130        140        150        160        170        180 
EIGTFHGGDL AGLTTKLEEG YFRALGVNAI WITAPYEQIR GWVVGGDKAF QHYSYHGYYT 

       190        200        210        220        230        240 
LDYTVLDQNM GTPDELRRFV DTAHEQDIRV IFDVVMNHPG YADLQTLDAF DIEVLWEGWE 

       250        260        270        280        290        300 
SATLSDYHSY IDYNNFAFTE WWGPDWIRAG LPGYQEGNST DDLTMQLAYL PDFKTESEQP 

       310        320        330        340        350        360 
VGLPPFLTRK ADTKAVAVDG YTVRDYLVAW LSAWVREYGI DGFRCDTAKH VELAAWSELK 

       370        380        390        400        410        420 
QAGTEALAAW KQDNPGKAID DAPFWMTGEV FPHGVVRDAY FDQGGFDNLI NFDFQNQLGD 

       430        440        450        460        470        480 
ILRGPASERW QRLDDLYADY AAQISDDASF NVLSYISSHD TKLFDREALV AAGTALLLAP 

       490        500        510        520        530        540 
GGVQIFYGDE SARPLGPSVS SDPQQNTRSD MNWDALADDV LAHWQTLGRF RRRHVALAKG 

       550        560        570        580        590        600 
THQKLGDAPY VFARSRDDDA VVVALLGQLG EAGADASETV RVPVGDVFPV GTRLRDAATG 

       610        620        630 
APLEVETDAS GGAVALTPGA SGVVLLERVA P 

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Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001804 Genomic DNA. Translation: ACY17644.1.
RefSeqYP_003269537.1. NC_013440.1.

3D structure databases

ProteinModelPortalD0LWJ4.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING502025.Hoch_5156.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACY17644; ACY17644; Hoch_5156.
GeneID8547567.
KEGGhoh:Hoch_5156.
PATRIC32200201. VBIHalOch22000_5220.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0366.
HOGENOMHOG000273912.
KOK01176.
OrthoDBEOG65QWH3.

Enzyme and pathway databases

BioCycHOCH502025:GI43-5197-MONOMER.

Family and domain databases

Gene3D3.20.20.80. 1 hit.
InterProIPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 2 hits.
ProtoNetSearch...

Entry information

Entry nameD0LWJ4_HALO1
AccessionPrimary (citable) accession number: D0LWJ4
Entry history
Integrated into UniProtKB/TrEMBL: December 15, 2009
Last sequence update: December 15, 2009
Last modified: November 13, 2013
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)