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D0LWJ4

- D0LWJ4_HALO1

UniProt

D0LWJ4 - D0LWJ4_HALO1

Protein
Submitted name:

Alpha amylase catalytic region

Gene

Hoch_5156

Organism
Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 26 (01 Oct 2014)
      Sequence version 1 (15 Dec 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. catalytic activity Source: InterPro
    2. cation binding Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro

    Enzyme and pathway databases

    BioCyciHOCH502025:GI43-5197-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Alpha amylase catalytic regionImported
    Gene namesi
    Ordered Locus Names:Hoch_5156Imported
    OrganismiHaliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2)Imported
    Taxonomic identifieri502025 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaMyxococcalesNannocystineaeKofleriaceaeHaliangium
    ProteomesiUP000001880: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi502025.Hoch_5156.

    Structurei

    3D structure databases

    ProteinModelPortaliD0LWJ4.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG0366.
    HOGENOMiHOG000273912.
    KOiK01176.
    OrthoDBiEOG65QWH3.

    Family and domain databases

    Gene3Di3.20.20.80. 1 hit.
    InterProiIPR015902. Glyco_hydro_13.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    [Graphical view]
    SMARTiSM00642. Aamy. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 2 hits.

    Sequencei

    Sequence statusi: Complete.

    D0LWJ4-1 [UniParc]FASTAAdd to Basket

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    MNATKGTTMQ SPHLLRPGHR AASMYPPARP VSAPATRARS PRLTRAAAAL    50
    LALLGLGACG GAPATQQPSE PGEPPVASEP DARPGSFADN PLVYFVITDR 100
    FFDGNAENNH SYGRKGDGGD EIGTFHGGDL AGLTTKLEEG YFRALGVNAI 150
    WITAPYEQIR GWVVGGDKAF QHYSYHGYYT LDYTVLDQNM GTPDELRRFV 200
    DTAHEQDIRV IFDVVMNHPG YADLQTLDAF DIEVLWEGWE SATLSDYHSY 250
    IDYNNFAFTE WWGPDWIRAG LPGYQEGNST DDLTMQLAYL PDFKTESEQP 300
    VGLPPFLTRK ADTKAVAVDG YTVRDYLVAW LSAWVREYGI DGFRCDTAKH 350
    VELAAWSELK QAGTEALAAW KQDNPGKAID DAPFWMTGEV FPHGVVRDAY 400
    FDQGGFDNLI NFDFQNQLGD ILRGPASERW QRLDDLYADY AAQISDDASF 450
    NVLSYISSHD TKLFDREALV AAGTALLLAP GGVQIFYGDE SARPLGPSVS 500
    SDPQQNTRSD MNWDALADDV LAHWQTLGRF RRRHVALAKG THQKLGDAPY 550
    VFARSRDDDA VVVALLGQLG EAGADASETV RVPVGDVFPV GTRLRDAATG 600
    APLEVETDAS GGAVALTPGA SGVVLLERVA P 631
    Length:631
    Mass (Da):68,863
    Last modified:December 15, 2009 - v1
    Checksum:i6E518BDF11F5B7F9
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001804 Genomic DNA. Translation: ACY17644.1.
    RefSeqiWP_012830236.1. NC_013440.1.
    YP_003269537.1. NC_013440.1.

    Genome annotation databases

    EnsemblBacteriaiACY17644; ACY17644; Hoch_5156.
    GeneIDi8547567.
    KEGGihoh:Hoch_5156.
    PATRICi32200201. VBIHalOch22000_5220.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001804 Genomic DNA. Translation: ACY17644.1 .
    RefSeqi WP_012830236.1. NC_013440.1.
    YP_003269537.1. NC_013440.1.

    3D structure databases

    ProteinModelPortali D0LWJ4.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 502025.Hoch_5156.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACY17644 ; ACY17644 ; Hoch_5156 .
    GeneIDi 8547567.
    KEGGi hoh:Hoch_5156.
    PATRICi 32200201. VBIHalOch22000_5220.

    Phylogenomic databases

    eggNOGi COG0366.
    HOGENOMi HOG000273912.
    KOi K01176.
    OrthoDBi EOG65QWH3.

    Enzyme and pathway databases

    BioCyci HOCH502025:GI43-5197-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.80. 1 hit.
    InterProi IPR015902. Glyco_hydro_13.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    [Graphical view ]
    SMARTi SM00642. Aamy. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 2 hits.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DSM 14365 / JCM 11303 / SMP-2Imported.

    Entry informationi

    Entry nameiD0LWJ4_HALO1
    AccessioniPrimary (citable) accession number: D0LWJ4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: December 15, 2009
    Last sequence update: December 15, 2009
    Last modified: October 1, 2014
    This is version 26 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3