Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

ABC transporter related protein

Gene

Hoch_5155

Organism
Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Biological processi

TransportSAAS annotation

Keywords - Ligandi

ATP-bindingSAAS annotation, Nucleotide-binding

Enzyme and pathway databases

BioCyciHOCH502025:GI43-5196-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ABC transporter related proteinImported
Gene namesi
Ordered Locus Names:Hoch_5155Imported
OrganismiHaliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2)Imported
Taxonomic identifieri502025 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaMyxococcalesNannocystineaeKofleriaceaeHaliangium
ProteomesiUP000001880 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi502025.Hoch_5155.

Family & Domainsi

Sequence similaritiesi

Contains ABC transporter domain.SAAS annotation

Phylogenomic databases

eggNOGiCOG3839.
KOiK10111.
OMAiRHIRIGE.
OrthoDBiEOG6T7N3V.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
3.40.50.300. 1 hit.
InterProiIPR003593. AAA+_ATPase.
IPR003439. ABC_transporter-like.
IPR017871. ABC_transporter_CS.
IPR008995. Mo/tungstate-bd_C_term_dom.
IPR012340. NA-bd_OB-fold.
IPR027417. P-loop_NTPase.
IPR013611. Transp-assoc_OB_typ2.
[Graphical view]
PfamiPF00005. ABC_tran. 1 hit.
PF08402. TOBE_2. 1 hit.
[Graphical view]
SMARTiSM00382. AAA. 1 hit.
[Graphical view]
SUPFAMiSSF50331. SSF50331. 1 hit.
SSF52540. SSF52540. 1 hit.
PROSITEiPS00211. ABC_TRANSPORTER_1. 1 hit.
PS50893. ABC_TRANSPORTER_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D0LWJ3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MADLVLREVR KSFDETEVIH GVDLDIEDGE FVVFVGPSGC GKSTLLRLIA
60 70 80 90 100
GLEDITGGEL RIGGELCNAQ PPSERGVAMV FQSYALYPHM SVRENMAFAL
110 120 130 140 150
KLQRASKDEI AKRVKRAARI LQIENLLERK PKQLSGGQRQ RVAIGRAIVR
160 170 180 190 200
EPKVFLFDEP LSNLDAALRV QMRIEIAKLH KELATTIVYV THDQVEAMTM
210 220 230 240 250
ADKIVVLAKG IVAQVGAPLE LYNYPQNRFV AGFIGSPKMN FLDATLRSAD
260 270 280 290 300
ASGATVELSG GFSVTASVDA ADLDGGAPVA LGIRPEHLVL LGDDSPAEGV
310 320 330 340 350
ARIPVEVALV EHLGEGTLVY VRVPGCRELI VCRTEGTTRV KDGQKIELGI
360 370 380 390
PADECHLFAG HETFVDDDAE DSGAEDIEVV QTGRASFKRL VDIEN
Length:395
Mass (Da):42,849
Last modified:December 15, 2009 - v1
Checksum:iD42E42A17D8E1CD6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001804 Genomic DNA. Translation: ACY17643.1.

Genome annotation databases

EnsemblBacteriaiACY17643; ACY17643; Hoch_5155.
KEGGihoh:Hoch_5155.
PATRICi32200199. VBIHalOch22000_5219.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001804 Genomic DNA. Translation: ACY17643.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi502025.Hoch_5155.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACY17643; ACY17643; Hoch_5155.
KEGGihoh:Hoch_5155.
PATRICi32200199. VBIHalOch22000_5219.

Phylogenomic databases

eggNOGiCOG3839.
KOiK10111.
OMAiRHIRIGE.
OrthoDBiEOG6T7N3V.

Enzyme and pathway databases

BioCyciHOCH502025:GI43-5196-MONOMER.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
3.40.50.300. 1 hit.
InterProiIPR003593. AAA+_ATPase.
IPR003439. ABC_transporter-like.
IPR017871. ABC_transporter_CS.
IPR008995. Mo/tungstate-bd_C_term_dom.
IPR012340. NA-bd_OB-fold.
IPR027417. P-loop_NTPase.
IPR013611. Transp-assoc_OB_typ2.
[Graphical view]
PfamiPF00005. ABC_tran. 1 hit.
PF08402. TOBE_2. 1 hit.
[Graphical view]
SMARTiSM00382. AAA. 1 hit.
[Graphical view]
SUPFAMiSSF50331. SSF50331. 1 hit.
SSF52540. SSF52540. 1 hit.
PROSITEiPS00211. ABC_TRANSPORTER_1. 1 hit.
PS50893. ABC_TRANSPORTER_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 14365 / JCM 11303 / SMP-2Imported.

Entry informationi

Entry nameiD0LWJ3_HALO1
AccessioniPrimary (citable) accession number: D0LWJ3
Entry historyi
Integrated into UniProtKB/TrEMBL: December 15, 2009
Last sequence update: December 15, 2009
Last modified: July 22, 2015
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.