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Protein
Submitted name:

ABC transporter related protein

Gene

Hoch_5155

Organism
Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi36 – 43ATPPROSITE-ProRule annotation8

GO - Molecular functioni

Keywordsi

Biological processTransportSAAS annotation
LigandATP-bindingPROSITE-ProRule annotationSAAS annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Submitted name:
ABC transporter related proteinImported
Gene namesi
Ordered Locus Names:Hoch_5155Imported
OrganismiHaliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2)Imported
Taxonomic identifieri502025 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaMyxococcalesNannocystineaeKofleriaceaeHaliangium
Proteomesi
  • UP000001880 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Interactioni

Protein-protein interaction databases

STRINGi502025.Hoch_5155.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini4 – 234ABC transporterInterPro annotationAdd BLAST231

Sequence similaritiesi

Belongs to the ABC transporter superfamily.SAAS annotation

Phylogenomic databases

eggNOGiENOG4108IJ9. Bacteria.
COG3839. LUCA.
KOiK10111.
OMAiKATRIYP.
OrthoDBiPOG091H04KA.

Family and domain databases

InterProiView protein in InterPro
IPR003593. AAA+_ATPase.
IPR003439. ABC_transporter-like.
IPR017871. ABC_transporter_CS.
IPR008995. Mo/tungstate-bd_C_term_dom.
IPR027417. P-loop_NTPase.
IPR013611. Transp-assoc_OB_typ2.
PfamiView protein in Pfam
PF00005. ABC_tran. 1 hit.
PF08402. TOBE_2. 1 hit.
SMARTiView protein in SMART
SM00382. AAA. 1 hit.
SUPFAMiSSF50331. SSF50331. 1 hit.
SSF52540. SSF52540. 1 hit.
PROSITEiView protein in PROSITE
PS00211. ABC_TRANSPORTER_1. 1 hit.
PS50893. ABC_TRANSPORTER_2. 1 hit.

Sequencei

Sequence statusi: Complete.

D0LWJ3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MADLVLREVR KSFDETEVIH GVDLDIEDGE FVVFVGPSGC GKSTLLRLIA
60 70 80 90 100
GLEDITGGEL RIGGELCNAQ PPSERGVAMV FQSYALYPHM SVRENMAFAL
110 120 130 140 150
KLQRASKDEI AKRVKRAARI LQIENLLERK PKQLSGGQRQ RVAIGRAIVR
160 170 180 190 200
EPKVFLFDEP LSNLDAALRV QMRIEIAKLH KELATTIVYV THDQVEAMTM
210 220 230 240 250
ADKIVVLAKG IVAQVGAPLE LYNYPQNRFV AGFIGSPKMN FLDATLRSAD
260 270 280 290 300
ASGATVELSG GFSVTASVDA ADLDGGAPVA LGIRPEHLVL LGDDSPAEGV
310 320 330 340 350
ARIPVEVALV EHLGEGTLVY VRVPGCRELI VCRTEGTTRV KDGQKIELGI
360 370 380 390
PADECHLFAG HETFVDDDAE DSGAEDIEVV QTGRASFKRL VDIEN
Length:395
Mass (Da):42,849
Last modified:December 15, 2009 - v1
Checksum:iD42E42A17D8E1CD6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001804 Genomic DNA. Translation: ACY17643.1.

Genome annotation databases

EnsemblBacteriaiACY17643; ACY17643; Hoch_5155.
KEGGihoh:Hoch_5155.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiD0LWJ3_HALO1
AccessioniPrimary (citable) accession number: D0LWJ3
Entry historyiIntegrated into UniProtKB/TrEMBL: December 15, 2009
Last sequence update: December 15, 2009
Last modified: June 7, 2017
This is version 54 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported