D0LWJ3 (D0LWJ3_HALO1) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ABC transporter related protein EMBL ACY17643.1

Gene names

Ordered Locus Names:

Hoch_5155

Organism

Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) [Complete proteome] [HAMAP]

Taxonomic identifier

502025 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › delta/epsilon subdivisions › Deltaproteobacteria › Myxococcales › Nannocystineae › Kofleriaceae › Haliangium › Haliangium ochraceum

Protein attributes

Sequence length	395 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Sequence similarities

Contains 1 ABC transporter domain. SAAS SAAS013611

Ontologies

Keywords
Biological process	Transport SAAS SAAS013611
Ligand	ATP-binding SAAS SAAS013611 Nucleotide-binding
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	ATP catabolic process Inferred from electronic annotation. Source: GOC
Cellular_component	ATP-binding cassette (ABC) transporter complex Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW ATPase activity Inferred from electronic annotation. Source: InterPro hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D0LWJ3 [UniParc]. Last modified December 15, 2009. Version 1. Checksum: D42E42A17D8E1CD6	FASTA	395	42,849
	10 20 30 40 50 60 MADLVLREVR KSFDETEVIH GVDLDIEDGE FVVFVGPSGC GKSTLLRLIA GLEDITGGEL 70 80 90 100 110 120 RIGGELCNAQ PPSERGVAMV FQSYALYPHM SVRENMAFAL KLQRASKDEI AKRVKRAARI 130 140 150 160 170 180 LQIENLLERK PKQLSGGQRQ RVAIGRAIVR EPKVFLFDEP LSNLDAALRV QMRIEIAKLH 190 200 210 220 230 240 KELATTIVYV THDQVEAMTM ADKIVVLAKG IVAQVGAPLE LYNYPQNRFV AGFIGSPKMN 250 260 270 280 290 300 FLDATLRSAD ASGATVELSG GFSVTASVDA ADLDGGAPVA LGIRPEHLVL LGDDSPAEGV 310 320 330 340 350 360 ARIPVEVALV EHLGEGTLVY VRVPGCRELI VCRTEGTTRV KDGQKIELGI PADECHLFAG 370 380 390 HETFVDDDAE DSGAEDIEVV QTGRASFKRL VDIEN

References

[1]

"Complete genome sequence of Haliangium ochraceum type strain (SMP-2)." US DOE Joint Genome Institute (JGI-PGF) Ivanova N., Daum C., Lang E., Abt B., Kopitz M., Saunders E., Lapidus A., Lucas S., Glavina Del Rio T., Nolan M., Tice H., Copeland A., Cheng J.F., Chen F., Bruce D., Goodwin L., Pitluck S., Mavromatis K. , Pati A., Mikhailova N., Chen A., Palaniappan K., Land M., Hauser L., Chang Y.J., Jeffries C.D., Detter J.C., Brettin T., Rohde M., Goker M., Bristow J., Markowitz V., Eisen J.A., Hugenholtz P., Kyrpides N.C., Klenk H.P. Stand. Genomic Sci. 2:96-106(2010) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 14365 / JCM 11303 / SMP-2.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001804 Genomic DNA. Translation: ACY17643.1.
RefSeq	YP_003269536.1. NC_013440.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	502025.Hoch_5155.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACY17643; ACY17643; Hoch_5155.
GeneID	8547566.
KEGG	hoh:Hoch_5155.
PATRIC	32200199. VBIHalOch22000_5219.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG3839.
KO	K10111.
Enzyme and pathway databases
BioCyc	HOCH502025:GI43-5196-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR003593. AAA+_ATPase. IPR003439. ABC_transporter-like. IPR017871. ABC_transporter_CS. IPR008995. Mo/tungstate-bd_C_term_dom. IPR012340. NA-bd_OB-fold. IPR013611. Transp-assoc_OB_typ2. [Graphical view]
Pfam	PF00005. ABC_tran. 1 hit. PF08402. TOBE_2. 1 hit. [Graphical view]
SMART	SM00382. AAA. 1 hit. [Graphical view]
SUPFAM	SSF50331. MOP_like. 1 hit.
PROSITE	PS00211. ABC_TRANSPORTER_1. 1 hit. PS50893. ABC_TRANSPORTER_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D0LWJ3_HALO1

Accession

Primary (citable) accession number: D0LWJ3

Entry history

Integrated into UniProtKB/TrEMBL:	December 15, 2009
Last sequence update:	December 15, 2009
Last modified:	May 1, 2013
This is version 26 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)