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Protein
Submitted name:

Pyridoxal-dependent decarboxylase

Gene

Hoch_6749

Organism
Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotation

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciHOCH502025:GI43-6797-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Pyridoxal-dependent decarboxylaseImported
Gene namesi
Ordered Locus Names:Hoch_6749Imported
OrganismiHaliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2)Imported
Taxonomic identifieri502025 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaMyxococcalesNannocystineaeKofleriaceaeHaliangium
ProteomesiUP000001880 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi502025.Hoch_6749.

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0076.
HOGENOMiHOG000282553.
KOiK01580.
OMAiIKQQDDF.
OrthoDBiEOG6MSRZP.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.

Sequencei

Sequence statusi: Complete.

D0LT77-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSTSRRSRPP ASSASDTHPA PAEDGAVAES AGARVVADYF ASADGAAART
60 70 80 90 100
LREGLDACLE QHRASERISS AHSMDELRAH FCRSTIPEEP AAPESYLAFL
110 120 130 140 150
REQVLPHAVK VGRPRYVGHM TSALPNFLPH LAALLTELNQ NIVKIETSKV
160 170 180 190 200
LTLIERQTLA MMHRLVFDLS DDFYQRHTQA RESNLGVVVS CGTLANITAM
210 220 230 240 250
WLARNRALQS SEEFLGLQSE GFLSALRHYG YQDAVIIGSE LMHYSMDKLG
260 270 280 290 300
SLIGLGAENI IKVATDGHGS IDLAALQDII ATCKDERRLI VALVGIAGTT
310 320 330 340 350
ETGAVDNLPA LAQVAEEHGI HFHVDAAWGG PILFSERHRD ILRGIERADT
360 370 380 390 400
VTICGHKQLY LPQGISMVLC RDPSLIYHIK ATARYQARAE SYDLGKHSPE
410 420 430 440 450
GSRPAMSLFL HAGLQLIGRA GYAHLIDEGV RKARLMAEMI REHEAFELLE
460 470 480 490 500
EPQTNIVVYR YIPEELRPKL HAGSLSREDQ YVINCINEVL QDQEFLGGDS
510 520 530 540 550
FISRTSLVHS RHGRPEPVVV LRAVLANPLT TEDDLRAVIA DQVNTADSVL
560 570
RQRTMSFAQV LSLLYQQTSS FDRQ
Length:574
Mass (Da):63,298
Last modified:December 15, 2009 - v1
Checksum:iAAE06DB2EA5E0E90
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001804 Genomic DNA. Translation: ACY19213.1.

Genome annotation databases

EnsemblBacteriaiACY19213; ACY19213; Hoch_6749.
KEGGihoh:Hoch_6749.
PATRICi32203473. VBIHalOch22000_6850.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001804 Genomic DNA. Translation: ACY19213.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi502025.Hoch_6749.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACY19213; ACY19213; Hoch_6749.
KEGGihoh:Hoch_6749.
PATRICi32203473. VBIHalOch22000_6850.

Phylogenomic databases

eggNOGiCOG0076.
HOGENOMiHOG000282553.
KOiK01580.
OMAiIKQQDDF.
OrthoDBiEOG6MSRZP.

Enzyme and pathway databases

BioCyciHOCH502025:GI43-6797-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 14365 / JCM 11303 / SMP-2Imported.

Entry informationi

Entry nameiD0LT77_HALO1
AccessioniPrimary (citable) accession number: D0LT77
Entry historyi
Integrated into UniProtKB/TrEMBL: December 15, 2009
Last sequence update: December 15, 2009
Last modified: July 22, 2015
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.