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D0LQ83 (D0LQ83_HALO1) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 24. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length301 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLyase EMBL ACY18892.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA repair

Inferred from electronic annotation. Source: InterPro

   Cellular_componentintracellular

Inferred from electronic annotation. Source: InterPro

   Molecular_functionDNA binding

Inferred from electronic annotation. Source: InterPro

DNA-(apurinic or apyrimidinic site) lyase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D0LQ83 [UniParc].

Last modified December 15, 2009. Version 1.
Checksum: DC86B4A751392112

FASTA30133,324
        10         20         30         40         50         60 
MLARVRVVSW NVNGLRAVDR TTPRRASAAA SPSPGQVRAS TGARAQRGGG RFRRWIERVD 

        70         80         90        100        110        120 
ATIVGVQEVR ARRDALPRRL LQPRGWHAHL VEAERAGYSG VGLYAKLAPD GADTALAGGD 

       130        140        150        160        170        180 
FDREGRLQIA HFGRLSVANV YFPNGNGSNR DNSRVPFKLD FYRALFDALG ALRDAGQRVL 

       190        200        210        220        230        240 
VMGDFNTAHR DIDLARPKQN RKTSGFLPEE RAELDRWVAA GWVDTFRHFE PGPGHYTWWS 

       250        260        270        280        290        300 
QRAGVRARNI GWRIDYVFAC PEAMPFVRSA FLMPQVGGSD HCPHGVVLDP AITRAAPPLP 


S 

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Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001804 Genomic DNA. Translation: ACY18892.1.
RefSeqYP_003270785.1. NC_013440.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING502025.Hoch_6423.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACY18892; ACY18892; Hoch_6423.
GeneID8548838.
KEGGhoh:Hoch_6423.
PATRIC32202801. VBIHalOch22000_6516.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0708.
HOGENOMHOG000034586.
KOK01142.
OrthoDBEOG6TBHJS.

Enzyme and pathway databases

BioCycHOCH502025:GI43-6469-MONOMER.

Family and domain databases

Gene3D3.60.10.10. 1 hit.
InterProIPR004808. AP_endonuc_1.
IPR020848. AP_endonuclease_F1_CS.
IPR005135. Endo/exonuclease/phosphatase.
[Graphical view]
PANTHERPTHR22748. PTHR22748. 1 hit.
PfamPF03372. Exo_endo_phos. 1 hit.
[Graphical view]
SUPFAMSSF56219. SSF56219. 2 hits.
TIGRFAMsTIGR00633. xth. 1 hit.
PROSITEPS00727. AP_NUCLEASE_F1_2. 1 hit.
PS51435. AP_NUCLEASE_F1_4. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD0LQ83_HALO1
AccessionPrimary (citable) accession number: D0LQ83
Entry history
Integrated into UniProtKB/TrEMBL: December 15, 2009
Last sequence update: December 15, 2009
Last modified: April 16, 2014
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)