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D0LJL3

- D0LJL3_HALO1

UniProt

D0LJL3 - D0LJL3_HALO1

Protein
Submitted name:

Uncharacterized protein

Gene

Hoch_4089

Organism
Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 24 (01 Oct 2014)
      Sequence version 1 (15 Dec 2009)
      Previous versions | rss
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    Functioni

    Enzyme and pathway databases

    BioCyciHOCH502025:GI43-4120-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Uncharacterized proteinImported
    Gene namesi
    Ordered Locus Names:Hoch_4089Imported
    OrganismiHaliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2)Imported
    Taxonomic identifieri502025 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaMyxococcalesNannocystineaeKofleriaceaeHaliangium
    ProteomesiUP000001880: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 2727 PotentialImportedAdd
    BLAST
    Chaini28 – 280253 PotentialImportedPRO_5000528729Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi502025.Hoch_4089.

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    4I66X-ray1.30A31-236[»]
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Region

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Regioni215 – 2162Sulfate bindingImported

    Keywords - Domaini

    SignalImported

    Phylogenomic databases

    eggNOGiNOG323201.
    HOGENOMiHOG000003271.
    OrthoDBiEOG632D1S.

    Family and domain databases

    InterProiIPR025297. DUF4159.
    IPR006311. TAT_signal.
    [Graphical view]
    PfamiPF13709. DUF4159. 1 hit.
    [Graphical view]
    PROSITEiPS51318. TAT. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    D0LJL3-1 [UniParc]FASTAAdd to Basket

    « Hide

    MRWSRRGVLG LGAAAAAWLA AGPARAIGPS SAFRFGQLAL GDRWDIYPQA    50
    LSRMSREIDK RTSIEAAREP AAVTLSSPTL HETPFLYLAG DREFAIPPEP 100
    EVEALRRHLT FGGFLLIDSA EGALGGAFDR SVRRLLQAVF PAPAPGLEIV 150
    SGEHVVFKSF YLLERPLGRL ALSPVMEGIL RDGRLMVAYV QNDLGGAFAR 200
    DDFGNFQLAC VPDGERQREL AFRMLVNLVM YALCLDYKSD QVHVPFIMRR 250
    RQWRPRDGAD SLADPLQRPL QGPSRGPGQP 280
    Length:280
    Mass (Da):30,880
    Last modified:December 15, 2009 - v1
    Checksum:i03876CA81CC09A3E
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001804 Genomic DNA. Translation: ACY16587.1.
    RefSeqiYP_003268480.1. NC_013440.1.

    Genome annotation databases

    EnsemblBacteriaiACY16587; ACY16587; Hoch_4089.
    GeneIDi8546490.
    KEGGihoh:Hoch_4089.
    PATRICi32197941. VBIHalOch22000_4097.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001804 Genomic DNA. Translation: ACY16587.1 .
    RefSeqi YP_003268480.1. NC_013440.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    4I66 X-ray 1.30 A 31-236 [» ]
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 502025.Hoch_4089.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACY16587 ; ACY16587 ; Hoch_4089 .
    GeneIDi 8546490.
    KEGGi hoh:Hoch_4089.
    PATRICi 32197941. VBIHalOch22000_4097.

    Phylogenomic databases

    eggNOGi NOG323201.
    HOGENOMi HOG000003271.
    OrthoDBi EOG632D1S.

    Enzyme and pathway databases

    BioCyci HOCH502025:GI43-4120-MONOMER.

    Family and domain databases

    InterProi IPR025297. DUF4159.
    IPR006311. TAT_signal.
    [Graphical view ]
    Pfami PF13709. DUF4159. 1 hit.
    [Graphical view ]
    PROSITEi PS51318. TAT. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DSM 14365 / JCM 11303 / SMP-2Imported.
    2. "Crystal structure of Hoch_4089 protein from Haliangium ochraceum."
      Michalska K., Mack J.C., Endres M., Joachimiak A.
      Submitted (NOV-2012) to the PDB data bank
      Cited for: X-RAY CRYSTALLOGRAPHY (1.30 ANGSTROMS) OF 31-236.

    Entry informationi

    Entry nameiD0LJL3_HALO1
    AccessioniPrimary (citable) accession number: D0LJL3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: December 15, 2009
    Last sequence update: December 15, 2009
    Last modified: October 1, 2014
    This is version 24 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported, Complete proteome, Reference proteomeImported

    External Data

    Dasty 3