D0LJL3 (D0LJL3_HALO1) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein EMBL ACY16587.1

Gene names

Ordered Locus Names:

Hoch_4089

Organism

Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) [Complete proteome] [HAMAP]

Taxonomic identifier

502025 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › delta/epsilon subdivisions › Deltaproteobacteria › Myxococcales › Nannocystineae › Kofleriaceae › Haliangium › Haliangium ochraceum

Protein attributes

Sequence length	280 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Evidence at protein level

Ontologies

Keywords
Domain	Signal EMBL ACY16587.1
Technical term	3D-structure PDB 4I66 Complete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 27	27	Potential EMBL ACY16587.1
	Chain	28 – 280	253	Potential EMBL ACY16587.1		PRO_5000528729

Sequences

	Sequence		Length	Mass (Da)
	D0LJL3 [UniParc]. Last modified December 15, 2009. Version 1. Checksum: 03876CA81CC09A3E	FASTA	280	30,880
	10 20 30 40 50 60 MRWSRRGVLG LGAAAAAWLA AGPARAIGPS SAFRFGQLAL GDRWDIYPQA LSRMSREIDK 70 80 90 100 110 120 RTSIEAAREP AAVTLSSPTL HETPFLYLAG DREFAIPPEP EVEALRRHLT FGGFLLIDSA 130 140 150 160 170 180 EGALGGAFDR SVRRLLQAVF PAPAPGLEIV SGEHVVFKSF YLLERPLGRL ALSPVMEGIL 190 200 210 220 230 240 RDGRLMVAYV QNDLGGAFAR DDFGNFQLAC VPDGERQREL AFRMLVNLVM YALCLDYKSD 250 260 270 280 QVHVPFIMRR RQWRPRDGAD SLADPLQRPL QGPSRGPGQP

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Complete genome sequence of Haliangium ochraceum type strain (SMP-2)." US DOE Joint Genome Institute (JGI-PGF) Ivanova N., Daum C., Lang E., Abt B., Kopitz M., Saunders E., Lapidus A., Lucas S., Glavina Del Rio T., Nolan M., Tice H., Copeland A., Cheng J.F., Chen F., Bruce D., Goodwin L., Pitluck S., Mavromatis K. , Pati A., Mikhailova N., Chen A., Palaniappan K., Land M., Hauser L., Chang Y.J., Jeffries C.D., Detter J.C., Brettin T., Rohde M., Goker M., Bristow J., Markowitz V., Eisen J.A., Hugenholtz P., Kyrpides N.C., Klenk H.P. Stand. Genomic Sci. 2:96-106(2010) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 14365 / JCM 11303 / SMP-2.
[2]	"Crystal structure of Hoch_4089 protein from Haliangium ochraceum." Michalska K., Mack J.C., Endres M., Joachimiak A. Submitted (NOV-2012) to the PDB data bank Cited for: X-RAY CRYSTALLOGRAPHY (1.30 ANGSTROMS) OF 31-236.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

CP001804 Genomic DNA. Translation: ACY16587.1.

RefSeq

YP_003268480.1. NC_013440.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
4I66	X-ray	1.30	A	31-236	[»]

ModBase

Search...

Protein-protein interaction databases

STRING

502025.Hoch_4089.

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Genome annotation databases

EnsemblBacteria

ACY16587; ACY16587; Hoch_4089.

GeneID

8546490.

KEGG

hoh:Hoch_4089.

PATRIC

32197941. VBIHalOch22000_4097.

Organism-specific databases

CMR

Search...

Phylogenomic databases

eggNOG

NOG323201.

HOGENOM

HOG000003271.

Enzyme and pathway databases

BioCyc

HOCH502025:GI43-4120-MONOMER.

Family and domain databases

InterPro

IPR025297. DUF4159.
IPR006311. TAT_signal.
[Graphical view]

Pfam

PF13709. DUF4159. 1 hit.
[Graphical view]

PROSITE

PS51318. TAT. 1 hit.
[Graphical view]

ProtoNet

Search...

Entry information

Entry name

D0LJL3_HALO1

Accession

Primary (citable) accession number: D0LJL3

Entry history

Integrated into UniProtKB/TrEMBL:	December 15, 2009
Last sequence update:	December 15, 2009
Last modified:	May 1, 2013
This is version 18 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)