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D0LCY3

- D0LCY3_GORB4

UniProt

D0LCY3 - D0LCY3_GORB4

Protein
Submitted name:

DNA polymerase LigD, polymerase domain protein

Gene

Gbro_3272

Organism
Gordonia bronchialis (strain ATCC 25592 / DSM 43247 / JCM 3198 / NCTC 10667) (Rhodococcus bronchialis)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 22 (01 Oct 2014)
      Sequence version 1 (15 Dec 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. DNA primase activity Source: InterPro

    Enzyme and pathway databases

    BioCyciGBRO526226:GHJF-3310-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA polymerase LigD, polymerase domain proteinImported
    Gene namesi
    Ordered Locus Names:Gbro_3272Imported
    OrganismiGordonia bronchialis (strain ATCC 25592 / DSM 43247 / JCM 3198 / NCTC 10667) (Rhodococcus bronchialis)Imported
    Taxonomic identifieri526226 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeGordoniaceaeGordonia
    ProteomesiUP000001219: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi526226.Gbro_3272.

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG3285.
    HOGENOMiHOG000244654.
    KOiK01971.
    OMAiPDEWRID.
    OrthoDBiEOG6FV833.

    Family and domain databases

    InterProiIPR002755. DNA_primase_S.
    IPR014145. LigD_pol.
    [Graphical view]
    PfamiPF01896. DNA_primase_S. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR02778. ligD_pol. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    D0LCY3-1 [UniParc]FASTAAdd to Basket

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    MSPDASAGEP VVLTVGDRPV RISSPDRVYF PERGETKMDL VEYYLSVGDG    50
    IVRALRERPC MLHRFPKGVT GKKVHQKRVP AGAPDWLETT EIYFPRYGRT 100
    ADELCVTELA SVIWAVQMST VEFHPWNSRR ADPESPDEWR IDLDPMPDCP 150
    FSRIQRVAGV VHEVLDELGM RGFPKTSGGR GLHIYVRIEP DWGFPDVRRA 200
    ALAFAREVEW RAPDDVTTTW WRKDRDPAAV FVDYNQNTRD HTMASAYSVR 250
    GNPRATVSAP VTWSEIDDIE PDDFTIATMP ARFADLGDLH AEIDDVAHRI 300
    DTLLAWAERD ELDGDTSDGP ESVDLDGS 328
    Length:328
    Mass (Da):36,979
    Last modified:December 15, 2009 - v1
    Checksum:i803D5CF5738189C0
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001802 Genomic DNA. Translation: ACY22476.1.
    RefSeqiWP_012834992.1. NC_013441.1.
    YP_003274369.1. NC_013441.1.

    Genome annotation databases

    EnsemblBacteriaiACY22476; ACY22476; Gbro_3272.
    GeneIDi8552647.
    KEGGigbr:Gbro_3272.
    PATRICi32186207. VBIGorBro114338_3344.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001802 Genomic DNA. Translation: ACY22476.1 .
    RefSeqi WP_012834992.1. NC_013441.1.
    YP_003274369.1. NC_013441.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 526226.Gbro_3272.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACY22476 ; ACY22476 ; Gbro_3272 .
    GeneIDi 8552647.
    KEGGi gbr:Gbro_3272.
    PATRICi 32186207. VBIGorBro114338_3344.

    Phylogenomic databases

    eggNOGi COG3285.
    HOGENOMi HOG000244654.
    KOi K01971.
    OMAi PDEWRID.
    OrthoDBi EOG6FV833.

    Enzyme and pathway databases

    BioCyci GBRO526226:GHJF-3310-MONOMER.

    Family and domain databases

    InterProi IPR002755. DNA_primase_S.
    IPR014145. LigD_pol.
    [Graphical view ]
    Pfami PF01896. DNA_primase_S. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR02778. ligD_pol. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 25592 / DSM 43247 / JCM 3198 / NCTC 10667Imported.

    Entry informationi

    Entry nameiD0LCY3_GORB4
    AccessioniPrimary (citable) accession number: D0LCY3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: December 15, 2009
    Last sequence update: December 15, 2009
    Last modified: October 1, 2014
    This is version 22 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3