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Protein
Submitted name:

AMP-dependent synthetase and ligase

Gene

Gbro_0083

Organism
Gordonia bronchialis (strain ATCC 25592 / DSM 43247 / JCM 3198 / NCTC 10667) (Rhodococcus bronchialis)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciGBRO526226:GHJF-78-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
AMP-dependent synthetase and ligaseImported
Gene namesi
Ordered Locus Names:Gbro_0083Imported
OrganismiGordonia bronchialis (strain ATCC 25592 / DSM 43247 / JCM 3198 / NCTC 10667) (Rhodococcus bronchialis)Imported
Taxonomic identifieri526226 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesGordoniaceaeGordonia
Proteomesi
  • UP000001219 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei99 – 121HelicalSequence analysisAdd BLAST23

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi526226.Gbro_0083.

Structurei

3D structure databases

ProteinModelPortaliD0LAA6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini60 – 427AMP-bindingInterPro annotationAdd BLAST368
Domaini437 – 514AMP-binding_CInterPro annotationAdd BLAST78

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG4108IQF. Bacteria.
COG0365. LUCA.
HOGENOMiHOG000229982.
KOiK01895.
OMAiRFWNIAD.
OrthoDBiPOG091H02SZ.

Family and domain databases

InterProiIPR025110. AMP-bd_C.
IPR020845. AMP-binding_CS.
IPR000873. AMP-dep_Synth/Lig.
[Graphical view]
PfamiPF00501. AMP-binding. 1 hit.
PF13193. AMP-binding_C. 1 hit.
[Graphical view]
PROSITEiPS00455. AMP_BINDING. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D0LAA6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTTTGGTQAA TTPAETVAGL LETYGAPDAN AAHLLVDGHD PAGIAFTSID
60 70 80 90 100
VDGDGNPVTS TITYGELADQ SKRFATALAA RGINRGDTVG VLMGKRTELV
110 120 130 140 150
VALLAIARLG AVYIPLFTAF APPAIEMRLR AAGATLVVTE PSQAAKLDGF
160 170 180 190 200
DDVATIVAGD EFDTLVRDSA PIAESVAVGG DGTLILLFTS GTTGAPKGVP
210 220 230 240 250
VPVKALASFV AYMRFGLDVA ADDVFWNAAD PGWAYGLYYG IVGPLAIGRA
260 270 280 290 300
NLLLHAGFSP ELTARILDEL EVTNFAAAPT VYRSLSKDPR IAGFRLRRAS
310 320 330 340 350
SAGEPLTPDV IDWATTALGT EVRDHYGQTE HGMFINNHWN DAIREPLIPG
360 370 380 390 400
SMGKPMPGFA AGIVDGQIAI DVPASPLYWF TGYLDAPEKT ASRYTEDGRW
410 420 430 440 450
YLTGDTGRVD DEGRYFFTAR DDDVIIMAGY RIGPFDVESV LITHPAVLDV
460 470 480 490 500
AVVGRPDELR GEVIEAFVVL ADGVAGTDEL ETELQQLVKT QFAAHAYPRA
510 520
VHFVDALPKT PSGKIQRFIL RKGEG
Length:525
Mass (Da):55,695
Last modified:December 15, 2009 - v1
Checksum:i73B96930ABD52E7F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001802 Genomic DNA. Translation: ACY19435.1.
RefSeqiWP_012832027.1. NC_013441.1.

Genome annotation databases

EnsemblBacteriaiACY19435; ACY19435; Gbro_0083.
KEGGigbr:Gbro_0083.
PATRICi32179598. VBIGorBro114338_0087.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001802 Genomic DNA. Translation: ACY19435.1.
RefSeqiWP_012832027.1. NC_013441.1.

3D structure databases

ProteinModelPortaliD0LAA6.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi526226.Gbro_0083.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACY19435; ACY19435; Gbro_0083.
KEGGigbr:Gbro_0083.
PATRICi32179598. VBIGorBro114338_0087.

Phylogenomic databases

eggNOGiENOG4108IQF. Bacteria.
COG0365. LUCA.
HOGENOMiHOG000229982.
KOiK01895.
OMAiRFWNIAD.
OrthoDBiPOG091H02SZ.

Enzyme and pathway databases

BioCyciGBRO526226:GHJF-78-MONOMER.

Family and domain databases

InterProiIPR025110. AMP-bd_C.
IPR020845. AMP-binding_CS.
IPR000873. AMP-dep_Synth/Lig.
[Graphical view]
PfamiPF00501. AMP-binding. 1 hit.
PF13193. AMP-binding_C. 1 hit.
[Graphical view]
PROSITEiPS00455. AMP_BINDING. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiD0LAA6_GORB4
AccessioniPrimary (citable) accession number: D0LAA6
Entry historyi
Integrated into UniProtKB/TrEMBL: December 15, 2009
Last sequence update: December 15, 2009
Last modified: November 2, 2016
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.