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D0L6V5 (D0L6V5_GORB4) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 27. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Gbro_4532 EMBL ACY23665.1
OrganismGordonia bronchialis (strain ATCC 25592 / DSM 43247 / JCM 3198 / NCTC 10667) (Rhodococcus bronchialis) [Complete proteome] [HAMAP] EMBL ACY23665.1
Taxonomic identifier526226 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeGordoniaceaeGordonia

Protein attributes

Sequence length797 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
D0L6V5 [UniParc].

Last modified December 15, 2009. Version 1.
Checksum: 3A59FF379FD9BD12

FASTA79789,963
        10         20         30         40         50         60 
MAPGDGTHLD VDGHRISITN LTKVLYPQTG TRKFEVIDYY SRIADVLLPH LRGRLVTRKR 

        70         80         90        100        110        120 
WPNGVESTPF FEKDMPESAP AWITRHGIEH SQRVINYAVV DSRATLVWLA QMAALELHAH 

       130        140        150        160        170        180 
QWRLPVIDDA LRANRMVLDL DPGPGVPLTE CAAVARLIRD LLADAGMDTY PVTSGGKGIH 

       190        200        210        220        230        240 
VYARLPRPVS PDAARTLAKE IATRLSREHP DTITATMAKT HREQRIFIDW SQNSGSKTTL 

       250        260        270        280        290        300 
SPYSLRGREQ PWVAAPRTWD ELDDPGLDQL LYTDVLDRVD ERGDLLDGLD DDYPASGPPS 

       310        320        330        340        350        360 
EQTEVHTPRP PTEDSTGTDD RQVINLREYR RKRDAAKTPE PFGDESHQSR TAQTAAPSGD 

       370        380        390        400        410        420 
PIFVIQEHHA RRLHYDFRLE HDGVLVSWAV PKNLPTDPDQ NRLAVRTEDH PMDYADFEGD 

       430        440        450        460        470        480 
IPAGEYGGGH VSIWDRGTFT TEKWREKEII VRLAGERVQG RYALIKTGDK NWLAHLMSDE 

       490        500        510        520        530        540 
PRPIVPDSLS DPRPMLATDE DIEGLSESEW AFEGKWDGYR ILLRYIGGEL RLTSRSGIDM 

       550        560        570        580        590        600 
TRDFPEIAEI TEHLGLLDVV LDGEVVALDS TGRTNFTLLT SRNHTDEPYT LRLYLFDILY 

       610        620        630        640        650        660 
LNGASLLRKT WTQRRELLEE LAPAFRHSRY VEVPPLLPGP GQVAADHSRE HNMEGVVAKR 

       670        680        690        700        710        720 
RSSIYQQGRR SASWLKHKNW SDIEVVIGGW RPGRGSRENT IGSLLLGLPE ETGLRYVGRV 

       730        740        750        760        770        780 
GTGFTDAALA SLAQELEPLR ISRSPFLEKL DRPVASTAIW VLPKIVGEVR FMDWTTTGHL 

       790 
RHPSWRGIRR DKLPGDL 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001802 Genomic DNA. Translation: ACY23665.1.
RefSeqYP_003275558.1. NC_013441.1.

3D structure databases

ProteinModelPortalD0L6V5.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING526226.Gbro_4532.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACY23665; ACY23665; Gbro_4532.
GeneID8553914.
KEGGgbr:Gbro_4532.
PATRIC32188848. VBIGorBro114338_4659.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3285.
HOGENOMHOG000222509.
KOK01971.
OMASKGIHLY.
OrthoDBEOG661H49.

Enzyme and pathway databases

BioCycGBRO526226:GHJF-4573-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD0L6V5_GORB4
AccessionPrimary (citable) accession number: D0L6V5
Entry history
Integrated into UniProtKB/TrEMBL: December 15, 2009
Last sequence update: December 15, 2009
Last modified: April 16, 2014
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)