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D0KX60 (D0KX60_HALNC) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 24. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length440 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequences

Sequence LengthMass (Da)Tools
D0KX60 [UniParc].

Last modified December 15, 2009. Version 1.
Checksum: 6810A67453CF4384

FASTA44047,057
        10         20         30         40         50         60 
MTAHAMTKSA QTTAPNDQSM NADLQARRLA ATPRGVGVMA GFYIDRAQNA EVWDVEGNRY 

        70         80         90        100        110        120 
IDFAGGIAVL NTGHRHPALV AAIEEQLKRF THTCYQVLPY ESYVRLAERI NALVPGHYAK 

       130        140        150        160        170        180 
KTAFFSSGAE AVENAVKIAR SSTGRPGIIA FSGGFHGRTM MGCALTGKVV PYKVGFGPFP 

       190        200        210        220        230        240 
SEVYHLPFPM ELHGVTVEDS LHALETLFKA EIEPSRVAAI IIEPVQGEGG FYVAPPQLLH 

       250        260        270        280        290        300 
GLRKVCDEHG ILLIFDEVQT GFGRTGKLFA TEYYDVLPDI VTMAKSMAGG MTLSAVCGRA 

       310        320        330        340        350        360 
EVMDAPAPGG LGGTYAGNPL AIAAALAVID VMEKEQLVER SNFLGEKLMA RLNAAQAAVP 

       370        380        390        400        410        420 
ALKEVRGLGS MVAAEFCDPA TGAPSPDAVK RVQQAALEEG LILLTCGVYA NVIRFLYPLT 

       430        440 
TEDTVFDEAL DILDRALAKA 

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References

[1]"Complete sequence of Halothiobacillus neapolitanus c2."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Davenport K., Brettin T., Detter J.C., Han C., Tapia R., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N. expand/collapse author list , Kerfeld C., Cannon G., Heinhort S.
Submitted (OCT-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 23641 / c2.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001801 Genomic DNA. Translation: ACX97180.1.
RefSeqYP_003264227.1. NC_013422.1.

3D structure databases

ProteinModelPortalD0KX60.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING555778.Hneap_2371.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACX97180; ACX97180; Hneap_2371.
GeneID8535535.
KEGGhna:Hneap_2371.
PATRIC32208764. VBIHalNea120669_2441.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0160.
HOGENOMHOG000020206.
KOK00823.
OMAASKSAYR.
OrthoDBEOG6QVRHN.

Enzyme and pathway databases

BioCycHNEA555778:GIVV-2423-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERPTHR11986. PTHR11986. 1 hit.
PfamPF00202. Aminotran_3. 1 hit.
[Graphical view]
PIRSFPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR00700. GABAtrnsam. 1 hit.
PROSITEPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD0KX60_HALNC
AccessionPrimary (citable) accession number: D0KX60
Entry history
Integrated into UniProtKB/TrEMBL: December 15, 2009
Last sequence update: December 15, 2009
Last modified: November 13, 2013
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)