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D0KLE3 (D0KLE3_PECWW) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 24. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Pecwa_1490 EMBL ACX87289.1
OrganismPectobacterium wasabiae (strain WPP163) [Complete proteome] [HAMAP] EMBL ACX87289.1
Taxonomic identifier561231 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaePectobacterium

Protein attributes

Sequence length404 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionAminotransferase EMBL ACX87289.1
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processbiosynthetic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionpyridoxal phosphate binding

Inferred from electronic annotation. Source: InterPro

transaminase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D0KLE3 [UniParc].

Last modified December 15, 2009. Version 1.
Checksum: CFD161463C2C0CC3

FASTA40445,506
        10         20         30         40         50         60 
MSPIEKSKKL ENVCYDIRGP VLKEAKRLEE EGNKVLKLNI GNPAPFGFEA PDEILVDVIR 

        70         80         90        100        110        120 
NLPTAQGYCD SKGLYSARKA IVQHYQARDM RDMTVEDVYI GNGVSELIVQ SMQALLNPGD 

       130        140        150        160        170        180 
EMLVPAPDYP LWTAAVSLSN GNAVHYLCDE SSDWFPDLDD IRKKITANTR GIVIINPNNP 

       190        200        210        220        230        240 
TGAVYSKELL LDIVSIAREH NLIIFADEIY DKILYDDAQH HSIAALAPDL LTVTFNGLSK 

       250        260        270        280        290        300 
TYRVAGFRQG WMVLNGPKKH AKGYIEGLEM LASMRLCANV PMQHAIQTAL GGYQSISEFI 

       310        320        330        340        350        360 
QPGGRLYEQR NRSWELINQI PGVSCVKPRG ALYMFPRIDA KRFNIHDDQK LVLDLLLQEK 

       370        380        390        400 
VLLVQGTAFN WPYPDHVRIV TLPRIDELDM AIHKLGRFLG HYHQ 

« Hide

References

[1]"Complete sequence of Pectobacterium wasabiae WPP163."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Balakrishnan V., Glasner J., Perna N.T.
Submitted (OCT-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: WPP163 EMBL ACX87289.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001790 Genomic DNA. Translation: ACX87289.1.
RefSeqYP_003258896.1. NC_013421.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING561231.Pecwa_1490.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACX87289; ACX87289; Pecwa_1490.
GeneID8529881.
KEGGpwa:Pecwa_1490.
PATRIC32277196. VBIPecWas23660_1429.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0436.
HOGENOMHOG000223042.
KOK14260.
OMARIVFLPH.
OrthoDBEOG6X9MJ6.

Enzyme and pathway databases

BioCycPWAS561231:GHO0-1532-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR004839. Aminotransferase_I/II.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD0KLE3_PECWW
AccessionPrimary (citable) accession number: D0KLE3
Entry history
Integrated into UniProtKB/TrEMBL: December 15, 2009
Last sequence update: December 15, 2009
Last modified: November 13, 2013
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)