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D0KFN5

- D0KFN5_PECWW

UniProt

D0KFN5 - D0KFN5_PECWW

Protein
Submitted name:

4-aminobutyrate aminotransferase

Gene

Pecwa_2545

Organism
Pectobacterium wasabiae (strain WPP163)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 28 (01 Oct 2014)
      Sequence version 1 (15 Dec 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. 4-aminobutyrate transaminase activity Source: InterPro
    2. pyridoxal phosphate binding Source: InterPro

    GO - Biological processi

    1. gamma-aminobutyric acid metabolic process Source: InterPro

    Keywords - Molecular functioni

    AminotransferaseImported, Transferase

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Enzyme and pathway databases

    BioCyciPWAS561231:GHO0-2597-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    4-aminobutyrate aminotransferaseImported
    Gene namesi
    Ordered Locus Names:Pecwa_2545Imported
    OrganismiPectobacterium wasabiae (strain WPP163)Imported
    Taxonomic identifieri561231 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaePectobacterium
    ProteomesiUP000000315: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi561231.Pecwa_2545.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0160.
    HOGENOMiHOG000020206.
    KOiK00823.
    OMAiVMCDFFA.
    OrthoDBiEOG6QVRHN.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProiIPR004632. 4NH2But_aminotransferase_bac.
    IPR005814. Aminotrans_3.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view]
    PANTHERiPTHR11986. PTHR11986. 1 hit.
    PfamiPF00202. Aminotran_3. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
    SUPFAMiSSF53383. SSF53383. 1 hit.
    TIGRFAMsiTIGR00700. GABAtrnsam. 1 hit.
    PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    D0KFN5-1 [UniParc]FASTAAdd to Basket

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    MKNSELNQRR LAATPRGVGV MCDFYAERAE NSTLWDVEGR EFIDFAAGIA    50
    VLNTGHRHPK IVAAVREQLD RFTHTAYQIV PYGSYVTLAE RINALAPIQG 100
    AAKTTFFTTG AEAVENAVKI ARAYTKRPGV IAFNAAFHGR TLLTMTLTGK 150
    VAPYSTGFGP FPGSIFHALY PNEKSGITVE QALESVERLM HIDIAADQVA 200
    AILLEPVQGE GGFHVAPPAF ISGLRKLCDE HGILLIADEV QTGFARTGKL 250
    FAMEYYAEKA DLITMAKSLG GGFPISGVVG RAEVMDAPSP GGLGGTYAGN 300
    PLSVASALAV LDVIEEEKLC QRALRLGAAL VETLEKVKAQ CPALVAIRAQ 350
    GSMVAAEFND PNTGKPSAEI TRQFQKSALE AGLLLLTCGV HGNVIRFLYP 400
    LTVPDEQFSK AMNILTRVLT Q 421
    Length:421
    Mass (Da):45,119
    Last modified:December 15, 2009 - v1
    Checksum:iC8083B6D5A6507CD
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001790 Genomic DNA. Translation: ACX88305.1.
    RefSeqiYP_003259912.1. NC_013421.1.

    Genome annotation databases

    EnsemblBacteriaiACX88305; ACX88305; Pecwa_2545.
    GeneIDi8530946.
    KEGGipwa:Pecwa_2545.
    PATRICi32279274. VBIPecWas23660_2457.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001790 Genomic DNA. Translation: ACX88305.1 .
    RefSeqi YP_003259912.1. NC_013421.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 561231.Pecwa_2545.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACX88305 ; ACX88305 ; Pecwa_2545 .
    GeneIDi 8530946.
    KEGGi pwa:Pecwa_2545.
    PATRICi 32279274. VBIPecWas23660_2457.

    Phylogenomic databases

    eggNOGi COG0160.
    HOGENOMi HOG000020206.
    KOi K00823.
    OMAi VMCDFFA.
    OrthoDBi EOG6QVRHN.

    Enzyme and pathway databases

    BioCyci PWAS561231:GHO0-2597-MONOMER.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProi IPR004632. 4NH2But_aminotransferase_bac.
    IPR005814. Aminotrans_3.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view ]
    PANTHERi PTHR11986. PTHR11986. 1 hit.
    Pfami PF00202. Aminotran_3. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
    SUPFAMi SSF53383. SSF53383. 1 hit.
    TIGRFAMsi TIGR00700. GABAtrnsam. 1 hit.
    PROSITEi PS00600. AA_TRANSFER_CLASS_3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: WPP163Imported.

    Entry informationi

    Entry nameiD0KFN5_PECWW
    AccessioniPrimary (citable) accession number: D0KFN5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: December 15, 2009
    Last sequence update: December 15, 2009
    Last modified: October 1, 2014
    This is version 28 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3