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Protein
Submitted name:

4-aminobutyrate aminotransferase

Gene

Pecwa_2545

Organism
Pectobacterium wasabiae (strain WPP163)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. 4-aminobutyrate transaminase activity Source: InterPro
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. gamma-aminobutyric acid metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

AminotransferaseImported, Transferase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciPWAS561231:GHO0-2597-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
4-aminobutyrate aminotransferaseImported
Gene namesi
Ordered Locus Names:Pecwa_2545Imported
OrganismiPectobacterium wasabiae (strain WPP163)Imported
Taxonomic identifieri561231 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaePectobacterium
ProteomesiUP000000315 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi561231.Pecwa_2545.

Structurei

3D structure databases

ProteinModelPortaliD0KFN5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0160.
HOGENOMiHOG000020206.
KOiK00823.
OMAiDFYAVKA.
OrthoDBiEOG6QVRHN.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR00700. GABAtrnsam. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D0KFN5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKNSELNQRR LAATPRGVGV MCDFYAERAE NSTLWDVEGR EFIDFAAGIA
60 70 80 90 100
VLNTGHRHPK IVAAVREQLD RFTHTAYQIV PYGSYVTLAE RINALAPIQG
110 120 130 140 150
AAKTTFFTTG AEAVENAVKI ARAYTKRPGV IAFNAAFHGR TLLTMTLTGK
160 170 180 190 200
VAPYSTGFGP FPGSIFHALY PNEKSGITVE QALESVERLM HIDIAADQVA
210 220 230 240 250
AILLEPVQGE GGFHVAPPAF ISGLRKLCDE HGILLIADEV QTGFARTGKL
260 270 280 290 300
FAMEYYAEKA DLITMAKSLG GGFPISGVVG RAEVMDAPSP GGLGGTYAGN
310 320 330 340 350
PLSVASALAV LDVIEEEKLC QRALRLGAAL VETLEKVKAQ CPALVAIRAQ
360 370 380 390 400
GSMVAAEFND PNTGKPSAEI TRQFQKSALE AGLLLLTCGV HGNVIRFLYP
410 420
LTVPDEQFSK AMNILTRVLT Q
Length:421
Mass (Da):45,119
Last modified:December 15, 2009 - v1
Checksum:iC8083B6D5A6507CD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001790 Genomic DNA. Translation: ACX88305.1.
RefSeqiYP_003259912.1. NC_013421.1.

Genome annotation databases

EnsemblBacteriaiACX88305; ACX88305; Pecwa_2545.
KEGGipwa:Pecwa_2545.
PATRICi32279274. VBIPecWas23660_2457.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001790 Genomic DNA. Translation: ACX88305.1.
RefSeqiYP_003259912.1. NC_013421.1.

3D structure databases

ProteinModelPortaliD0KFN5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi561231.Pecwa_2545.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACX88305; ACX88305; Pecwa_2545.
KEGGipwa:Pecwa_2545.
PATRICi32279274. VBIPecWas23660_2457.

Phylogenomic databases

eggNOGiCOG0160.
HOGENOMiHOG000020206.
KOiK00823.
OMAiDFYAVKA.
OrthoDBiEOG6QVRHN.

Enzyme and pathway databases

BioCyciPWAS561231:GHO0-2597-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR00700. GABAtrnsam. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: WPP163Imported.

Entry informationi

Entry nameiD0KFN5_PECWW
AccessioniPrimary (citable) accession number: D0KFN5
Entry historyi
Integrated into UniProtKB/TrEMBL: December 15, 2009
Last sequence update: December 15, 2009
Last modified: April 29, 2015
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.