D0KAB4 (D0KAB4_PECWW) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Sodium:dicarboxylate symporter EMBL ACX87579.1

Gene names

Ordered Locus Names:

Pecwa_1793

Organism

Pectobacterium wasabiae (strain WPP163) [Complete proteome] [HAMAP] EMBL ACX87579.1

Taxonomic identifier

561231 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Pectobacterium › Pectobacterium wasabiae

Protein attributes

Sequence length	438 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Biological process	Symport SAAS SAAS018107 Transport
Cellular component	Membrane
Domain	Transmembrane Transmembrane helix SAAS SAAS018107
Technical term	Complete proteome
Gene Ontology (GO)
Cellular_component	integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	sodium:dicarboxylate symporter activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D0KAB4 [UniParc]. Last modified December 15, 2009. Version 1. Checksum: 979C8C0F8CE49F1F	FASTA	438	47,280
	10 20 30 40 50 60 MKTQKISLAW QILIALVLGI ALGAVLHEQQ ESRQWLISNI LSPAGDIFIR LIKMIVVPIV 70 80 90 100 110 120 IATLIVGIAG VGDAKKLGRI GFKTILYFEI ITTVAIILGI TLANIFQPGH GIDMSTLTAV 130 140 150 160 170 180 DISQYQKTTE QVQSGSHSLV GTVLSLIPPN IFAAMARGDM LPIIFFSVLF GLGLSSLPKE 190 200 210 220 230 240 HRDPLLNVFR GVSETMFKVT HMIMRYAPVG VFALISVTVA NFGFASLWPL AKLVMLVYAA 250 260 270 280 290 300 IIFFGLVVLG AVARLCKLRV TMLIRILKDE LILAYSTASS ETVLPRIIEK MEAYGAPKSI 310 320 330 340 350 360 TSFVVPTGYS FNLDGSTLYQ SIAAIFIAQL YGIELSIGQE IVLVLTLMLT SKGIAGVPGV 370 380 390 400 410 420 SFVVLLATLG SVGIPLEGLA FIAGVDRILD MARTALNVVG NALAVLVIAK WEHQFDEKKA 430 LAYEREIKGM SIRPAQQG

References

[1]

"Complete sequence of Pectobacterium wasabiae WPP163." US DOE Joint Genome Institute Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Balakrishnan V., Glasner J., Perna N.T. Submitted (OCT-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: WPP163.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001790 Genomic DNA. Translation: ACX87579.1.
RefSeq	YP_003259186.1. NC_013421.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACX87579; ACX87579; Pecwa_1793.
GeneID	8530191.
KEGG	pwa:Pecwa_1793.
PATRIC	32277782. VBIPecWas23660_1714.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1301.
HOGENOM	HOG000208778.
KO	K11102.
OMA	VMVIAFP.
Enzyme and pathway databases
BioCyc	PWAS561231:GHO0-1842-MONOMER.
Family and domain databases
InterPro	IPR001991. Na-dicarboxylate_symporter. IPR018107. Na-dicarboxylate_symporter_CS. [Graphical view]
PANTHER	PTHR11958. PTHR11958. 1 hit.
Pfam	PF00375. SDF. 1 hit. [Graphical view]
PRINTS	PR00173. EDTRNSPORT.
PROSITE	PS00713. NA_DICARBOXYL_SYMP_1. 1 hit. PS00714. NA_DICARBOXYL_SYMP_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D0KAB4_PECWW

Accession

Primary (citable) accession number: D0KAB4

Entry history

Integrated into UniProtKB/TrEMBL:	December 15, 2009
Last sequence update:	December 15, 2009
Last modified:	May 29, 2013
This is version 26 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)