D0K9K4 (D0K9K4_STAAD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Ribulokinase HAMAP MF_00520
EC=2.7.1.16 HAMAP MF_00520

Gene names

Name:	araB HAMAP MF_00520
Ordered Locus Names:	SAAV_0515

Organism

Staphylococcus aureus (strain ED98) [Complete proteome] [HAMAP]

Taxonomic identifier

681288 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Bacillales › Staphylococcus

Protein attributes

Sequence length	545 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	ATP + L(or D)-ribulose = ADP + L(or D)-ribulose 5-phosphate. HAMAP MF_00520 SAAS SAAS005929
Pathway	Carbohydrate degradation; L-arabinose degradation via L-ribulose; D-xylulose 5-phosphate from L-arabinose (bacterial route): step 2/3. HAMAP MF_00520 SAAS SAAS005929
Sequence similarities	Belongs to the ribulokinase family. HAMAP MF_00520

Ontologies

Keywords
Biological process	Arabinose catabolism HAMAP MF_00520 SAAS SAAS005929 Carbohydrate metabolism
Ligand	ATP-binding HAMAP MF_00520 SAAS SAAS005929 Nucleotide-binding
Molecular function	Kinase HAMAP MF_00520 SAAS SAAS005929 EMBL ACY10438.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	L-arabinose catabolic process Inferred from electronic annotation. Source: HAMAP
Molecular function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW ribulokinase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D0K9K4 [UniParc]. Last modified December 15, 2009. Version 1. Checksum: E3917036237CEA4B	FASTA	545	60,965
	10 20 30 40 50 60 MSYSIGIDYG TASGRVFLIN TTNGQVVSKF VKPYTHGVIE SELNGLKIPH TYALQNSNDY 70 80 90 100 110 120 LEIMEEGISY IVRESKIDPV NIVGIGIDFT SSTIIFTDEN LNPVHNLKQF KNNPHAYVKL 130 140 150 160 170 180 WKHHGAYKEA EKLYQTAIEN NNKWLGHYGY NVSSEWMIPK IMEVMNRAPE IMEKTAYIME 190 200 210 220 230 240 AGDWIVNKLT NKNVRSNCGL GFKAFWEEET GFHYDLFDKI DPKLSKVIQD KVSAPVVNIG 250 260 270 280 290 300 EVVGKLDDKM AQKLGLSKET MVSPFIIDAH ASLLGIGSEK DKEMTMVMGT STCHLMLNEK 310 320 330 340 350 360 QHQVPGISGS VKGAIIPELF AYEAGQSAVG DLFEYVAKQA PKSYVDEAAN RNMTVFELMN 370 380 390 400 410 420 EKIKHQMPGE SGLIALDWHN GNRSVLSDSN LTGCIFGLTL QTKHEDIYRA YLEATAFGTK 430 440 450 460 470 480 MIMQQYQDWH MEVEKVFACG GIPKKNAVMM DIYANVLNKK LIVMDSEYAP AIGAAILGAV 490 500 510 520 530 540 SGGAHNSIND AVDAMKEPIL YEINPEAEKV QRYETLFKAY KALHDIHGYK KANIMKDIQS LRVEG

References

[1]

"Recent human-to-poultry host jump, adaptation, and pandemic spread of Staphylococcus aureus." Lowder B.V., Guinane C.M., Ben Zakour N.L., Weinert L.A., Conway-Morris A., Cartwright R.A., Simpson A.J., Rambaut A., Nubel U., Fitzgerald J.R. Proc. Natl. Acad. Sci. U.S.A. 106:19545-19550(2009) [PubMed: 19884497] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001781 Genomic DNA. Translation: ACY10438.1.
RefSeq	YP_003281444.1. NC_013450.1.
3D structure databases
ProteinModelPortal	D0K9K4.
ModBase	Search...
Protein-protein interaction databases
STRING	D0K9K4.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EBSTAT00000056315; EBSTAP00000054244; EBSTAG00000055206.
GeneID	8613277.
GenomeReviews	Gene locus SAAV_0515 in contig CP001781_GR.
KEGG	sad:SAAV_0515.
PATRIC	32445058. VBIStaAur139507_0505.
Organism-specific databases
CMR	Search...
Phylogenomic databases
GeneTree	EBGT00050000024725.
OMA	NGRRTPD.
Family and domain databases
HAMAP	MF_00520. Ribulokinase. [Tree]
InterPro	IPR000577. Carb_kinase_FGGY. IPR018485. Carb_kinase_FGGY_C. IPR018484. Carb_kinase_FGGY_N. IPR005929. L_ribulokin. [Graphical view]
KO	K00853.
PANTHER	PTHR10196. FGGY_kin. 1 hit.
Pfam	PF02782. FGGY_C. 1 hit. PF00370. FGGY_N. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D0K9K4_STAAD

Accession

Primary (citable) accession number: D0K9K4

Entry history

Integrated into UniProtKB/TrEMBL:	December 15, 2009
Last sequence update:	December 15, 2009
Last modified:	December 14, 2011
This is version 13 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)