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D0K5P6 (D0K5P6_STAAD) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 33. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
ATP-dependent Clp protease ATP-binding subunit ClpX HAMAP-Rule MF_00175
Gene names
Name:clpX HAMAP-Rule MF_00175 EMBL ACY11556.1
Ordered Locus Names:SAAV_1662 EMBL ACY11556.1
OrganismStaphylococcus aureus (strain ED98) [Complete proteome] [HAMAP] EMBL ACY11556.1
Taxonomic identifier681288 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Bacilli › Bacillales › Staphylococcus ›

Protein attributes

Sequence length420 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP By similarity. HAMAP-Rule MF_00175 SAAS SAAS010603

Subunit structure

Heterodimer of ClpP and ClpX By similarity. HAMAP-Rule MF_00175 SAAS SAAS010603

Sequence similarities

Belongs to the ClpX chaperone family. HAMAP-Rule MF_00175

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Zinc finger13 – 3826C4-type By similarity HAMAP-Rule MF_00175
Nucleotide binding117 – 1248ATP By similarity HAMAP-Rule MF_00175

Sequences

Sequence LengthMass (Da)Tools
D0K5P6 [UniParc].

Last modified December 15, 2009. Version 1.
Checksum: 3C311F319AD8D71C

FASTA42046,297
        10         20         30         40         50         60 
MFKFNEDEEN LKCSFCGKDQ DQVKKLVAGS GVYICNECIE LCSEIVEEEL AQNTSEAMTE 

        70         80         90        100        110        120 
LPTPKEIMDH LNEYVIGQEK AKKSLAVAVY NHYKRIQQLG PKEDDVELQK SNIALIGPTG 

       130        140        150        160        170        180 
SGKTLLAQTL AKTLNVPFAI ADATSLTEAG YVGDDVENIL LRLIQAADFD IDKAEKGIIY 

       190        200        210        220        230        240 
VDEIDKIARK SENTSITRDV SGEGVQQALL KILEGTTASV PPQGGRKHPN QEMIQIDTTN 

       250        260        270        280        290        300 
ILFILGGAFD GIEEVIKRRL GEKVIGFSSN EADKYDEQAL LAQIRPEDLQ AYGLIPEFIG 

       310        320        330        340        350        360 
RVPIVANLET LDVTALKNIL TQPKNALVKQ YTKMLELDDV DLEFTEEALS AISEKAIERK 

       370        380        390        400        410        420 
TGARGLRSII EESLIDIMFD VPSNENVTKV VITAQTINEE TEPELYDAEG NLINNSKTSA

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References

[1]"Recent human-to-poultry host jump, adaptation, and pandemic spread of Staphylococcus aureus."
Lowder B.V., Guinane C.M., Ben Zakour N.L., Weinert L.A., Conway-Morris A., Cartwright R.A., Simpson A.J., Rambaut A., Nuebel U., Fitzgerald J.R.
Proc. Natl. Acad. Sci. U.S.A. 106:19545-19550(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ED98 EMBL ACY11556.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001781 Genomic DNA. Translation: ACY11556.1.
RefSeqYP_003282562.1. NC_013450.1.

3D structure databases

ProteinModelPortalD0K5P6.
SMRD0K5P6. Positions 11-49, 61-405.
ModBaseSearch...

Protein-protein interaction databases

STRING681288.SAAV_1662.

Proteomic databases

PRIDED0K5P6.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACY11556; ACY11556; SAAV_1662.
GeneID8614403.
KEGGsad:SAAV_1662.
PATRIC32447385. VBIStaAur139507_1668.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1219.
HOGENOMHOG000010093.
KOK03544.
OMAMEMRESA.

Enzyme and pathway databases

BioCycSAUR681288:GJ8Z-1637-MONOMER.

Family and domain databases

HAMAPMF_00175. ClpX.
InterProIPR003593. AAA+_ATPase.
IPR013093. ATPase_AAA-2.
IPR019489. Clp_ATPase_C.
IPR004487. Clp_protease_ATP-bd_su_ClpX.
IPR027417. P-loop_NTPase.
IPR010603. Znf_CppX_C4.
[Graphical view]
PANTHERPTHR11262:SF4. PTHR11262:SF4. 1 hit.
PfamPF07724. AAA_2. 1 hit.
PF10431. ClpB_D2-small. 1 hit.
PF06689. zf-C4_ClpX. 1 hit.
[Graphical view]
SMARTSM00382. AAA. 1 hit.
SM01086. ClpB_D2-small. 1 hit.
SM00994. zf-C4_ClpX. 1 hit.
[Graphical view]
SUPFAMSSF52540. SSF52540. 1 hit.
TIGRFAMsTIGR00382. clpX. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD0K5P6_STAAD
AccessionPrimary (citable) accession number: D0K5P6
Entry history
Integrated into UniProtKB/TrEMBL: December 15, 2009
Last sequence update: December 15, 2009
Last modified: May 29, 2013
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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