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D0K4X4

- D0K4X4_STAAD

UniProt

D0K4X4 - D0K4X4_STAAD

Protein

Alanine racemase

Gene

SAAV_1382

Organism
Staphylococcus aureus (strain ED98)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 39 (01 Oct 2014)
      Sequence version 1 (15 Dec 2009)
      Previous versions | rss
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    Functioni

    Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids.UniRule annotation

    Catalytic activityi

    L-alanine = D-alanine.UniRule annotation

    Cofactori

    Pyridoxal phosphate.UniRule annotationSAAS annotation

    Pathwayi

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei30 – 301Proton acceptor; specific for D-alanineUniRule annotation
    Binding sitei122 – 1221SubstrateUniRule annotation
    Active sitei256 – 2561Proton acceptor; specific for L-alanineUniRule annotation
    Binding sitei303 – 3031Substrate; via amide nitrogenUniRule annotation

    GO - Molecular functioni

    1. alanine racemase activity Source: UniProtKB-HAMAP
    2. pyridoxal phosphate binding Source: UniProtKB-HAMAP

    GO - Biological processi

    1. D-alanine biosynthetic process Source: UniProtKB-UniPathway

    Keywords - Molecular functioni

    IsomeraseUniRule annotationSAAS annotation

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotationSAAS annotation

    Enzyme and pathway databases

    BioCyciSAUR681288:GJ8Z-1363-MONOMER.
    UniPathwayiUPA00042; UER00497.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Alanine racemaseUniRule annotation (EC:5.1.1.1UniRule annotation)
    Gene namesi
    Ordered Locus Names:SAAV_1382Imported
    OrganismiStaphylococcus aureus (strain ED98)Imported
    Taxonomic identifieri681288 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesStaphylococcus
    ProteomesiUP000002570: Chromosome

    PTM / Processingi

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Modified residuei30 – 301N6-(pyridoxal phosphate)lysineUniRule annotation

    Interactioni

    Protein-protein interaction databases

    STRINGi681288.SAAV_1382.

    Structurei

    3D structure databases

    ProteinModelPortaliD0K4X4.
    SMRiD0K4X4. Positions 3-357.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the alanine racemase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0787.
    HOGENOMiHOG000280025.
    KOiK01775.
    OMAiAYHYGLE.
    OrthoDBiEOG6PP9NJ.

    Family and domain databases

    Gene3Di2.40.37.10. 1 hit.
    3.20.20.10. 1 hit.
    HAMAPiMF_01201. Ala_racemase.
    InterProiIPR000821. Ala_racemase.
    IPR009006. Ala_racemase/Decarboxylase_C.
    IPR011079. Ala_racemase_C.
    IPR001608. Ala_racemase_N.
    IPR029066. PLP-binding_barrel.
    [Graphical view]
    PfamiPF00842. Ala_racemase_C. 1 hit.
    PF01168. Ala_racemase_N. 1 hit.
    [Graphical view]
    PRINTSiPR00992. ALARACEMASE.
    SMARTiSM01005. Ala_racemase_C. 1 hit.
    [Graphical view]
    SUPFAMiSSF50621. SSF50621. 1 hit.
    SSF51419. SSF51419. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    D0K4X4-1 [UniParc]FASTAAdd to Basket

    « Hide

    MTATWSVNKK IFLQNAITVK NNQPLMAVVK NNAYHYDLEF AVTQFIHAGI    50
    DTFSTTSLRE AIQIRQLAPD ATIFLMNAVY EFDLVREHQI HMTLPSLTYY 100
    YNHKNDLAGI HVHLEFENLL HRSGFKDLNE IKEVLKDHHH NQNAKMIISG 150
    LWTHFGYADE FDVSDYNVER SQWMEIVEAL LSEGYQFDLI HAQNSASFYR 200
    EGQILLPHHT HARVGIALYG SRPYSSLNQH DIVQSLTVKA HVIQVREVQA 250
    GDYCGYSFAF EVTKNNTKLA VVDIGYGDGI LRTRAKHEAL INGKRYPIRA 300
    LMMSHMFVEV DGNVHAQDEV ILYNNDIRID EYTFKGVGAN SEQLSAMNHD 350
    SLKKEYISND C 361
    Length:361
    Mass (Da):41,396
    Last modified:December 15, 2009 - v1
    Checksum:i1EA4213C509CF5CA
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001781 Genomic DNA. Translation: ACY11284.1.
    RefSeqiYP_003282290.1. NC_013450.1.

    Genome annotation databases

    EnsemblBacteriaiACY11284; ACY11284; SAAV_1382.
    GeneIDi8614129.
    KEGGisad:SAAV_1382.
    PATRICi32446811. VBIStaAur139507_1380.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001781 Genomic DNA. Translation: ACY11284.1 .
    RefSeqi YP_003282290.1. NC_013450.1.

    3D structure databases

    ProteinModelPortali D0K4X4.
    SMRi D0K4X4. Positions 3-357.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 681288.SAAV_1382.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACY11284 ; ACY11284 ; SAAV_1382 .
    GeneIDi 8614129.
    KEGGi sad:SAAV_1382.
    PATRICi 32446811. VBIStaAur139507_1380.

    Phylogenomic databases

    eggNOGi COG0787.
    HOGENOMi HOG000280025.
    KOi K01775.
    OMAi AYHYGLE.
    OrthoDBi EOG6PP9NJ.

    Enzyme and pathway databases

    UniPathwayi UPA00042 ; UER00497 .
    BioCyci SAUR681288:GJ8Z-1363-MONOMER.

    Family and domain databases

    Gene3Di 2.40.37.10. 1 hit.
    3.20.20.10. 1 hit.
    HAMAPi MF_01201. Ala_racemase.
    InterProi IPR000821. Ala_racemase.
    IPR009006. Ala_racemase/Decarboxylase_C.
    IPR011079. Ala_racemase_C.
    IPR001608. Ala_racemase_N.
    IPR029066. PLP-binding_barrel.
    [Graphical view ]
    Pfami PF00842. Ala_racemase_C. 1 hit.
    PF01168. Ala_racemase_N. 1 hit.
    [Graphical view ]
    PRINTSi PR00992. ALARACEMASE.
    SMARTi SM01005. Ala_racemase_C. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50621. SSF50621. 1 hit.
    SSF51419. SSF51419. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ED98Imported.

    Entry informationi

    Entry nameiD0K4X4_STAAD
    AccessioniPrimary (citable) accession number: D0K4X4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: December 15, 2009
    Last sequence update: December 15, 2009
    Last modified: October 1, 2014
    This is version 39 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3