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D0K4X4

- D0K4X4_STAAD

UniProt

D0K4X4 - D0K4X4_STAAD

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Protein
Alanine racemase
Gene
SAAV_1382
Organism
Staphylococcus aureus (strain ED98)
Status
Unreviewed - Annotation score: 2 out of 5 - Experimental evidence at protein leveli

Functioni

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids By similarity.UniRule annotation

Catalytic activityi

L-alanine = D-alanine.UniRule annotation

Cofactori

Pyridoxal phosphate By similarity.UniRule annotationSAAS annotations

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei30 – 301Proton acceptor; specific for D-alanine By similarityUniRule annotation
Binding sitei122 – 1221Substrate By similarityUniRule annotation
Active sitei256 – 2561Proton acceptor; specific for L-alanine By similarityUniRule annotation
Binding sitei303 – 3031Substrate; via amide nitrogen By similarityUniRule annotation

GO - Molecular functioni

  1. alanine racemase activity Source: UniProtKB-HAMAP
  2. pyridoxal phosphate binding Source: UniProtKB-HAMAP
Complete GO annotation...

GO - Biological processi

  1. D-alanine biosynthetic process Source: UniProtKB-UniPathway
Complete GO annotation...

Keywords - Molecular functioni

IsomeraseUniRule annotationSAAS annotations

Keywords - Ligandi

Pyridoxal phosphateUniRule annotationSAAS annotations

Enzyme and pathway databases

BioCyciSAUR681288:GJ8Z-1363-MONOMER.
UniPathwayiUPA00042; UER00497.

Names & Taxonomyi

Protein namesi
Recommended name:
Alanine racemaseUniRule annotation (EC:5.1.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:SAAV_1382Imported
OrganismiStaphylococcus aureus (strain ED98)Imported
Taxonomic identifieri681288 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesStaphylococcus
ProteomesiUP000002570: Chromosome

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei30 – 301N6-(pyridoxal phosphate)lysine By similarityUniRule annotation

Interactioni

Protein-protein interaction databases

STRINGi681288.SAAV_1382.

Structurei

3D structure databases

ProteinModelPortaliD0K4X4.
SMRiD0K4X4. Positions 3-357.

Family & Domainsi

Sequence similaritiesi

Belongs to the alanine racemase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0787.
HOGENOMiHOG000280025.
KOiK01775.
OMAiAYHYGLE.
OrthoDBiEOG6PP9NJ.

Family and domain databases

Gene3Di2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
HAMAPiMF_01201. Ala_racemase.
InterProiIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR029066. PLP-binding_barrel.
[Graphical view]
PfamiPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSiPR00992. ALARACEMASE.
SMARTiSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMiSSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.

Sequencei

Sequence statusi: Complete.

D0K4X4-1 [UniParc]FASTAAdd to Basket

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MTATWSVNKK IFLQNAITVK NNQPLMAVVK NNAYHYDLEF AVTQFIHAGI    50
DTFSTTSLRE AIQIRQLAPD ATIFLMNAVY EFDLVREHQI HMTLPSLTYY 100
YNHKNDLAGI HVHLEFENLL HRSGFKDLNE IKEVLKDHHH NQNAKMIISG 150
LWTHFGYADE FDVSDYNVER SQWMEIVEAL LSEGYQFDLI HAQNSASFYR 200
EGQILLPHHT HARVGIALYG SRPYSSLNQH DIVQSLTVKA HVIQVREVQA 250
GDYCGYSFAF EVTKNNTKLA VVDIGYGDGI LRTRAKHEAL INGKRYPIRA 300
LMMSHMFVEV DGNVHAQDEV ILYNNDIRID EYTFKGVGAN SEQLSAMNHD 350
SLKKEYISND C 361
Length:361
Mass (Da):41,396
Last modified:December 15, 2009 - v1
Checksum:i1EA4213C509CF5CA
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001781 Genomic DNA. Translation: ACY11284.1.
RefSeqiYP_003282290.1. NC_013450.1.

Genome annotation databases

EnsemblBacteriaiACY11284; ACY11284; SAAV_1382.
GeneIDi8614129.
KEGGisad:SAAV_1382.
PATRICi32446811. VBIStaAur139507_1380.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001781 Genomic DNA. Translation: ACY11284.1 .
RefSeqi YP_003282290.1. NC_013450.1.

3D structure databases

ProteinModelPortali D0K4X4.
SMRi D0K4X4. Positions 3-357.
ModBasei Search...

Protein-protein interaction databases

STRINGi 681288.SAAV_1382.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACY11284 ; ACY11284 ; SAAV_1382 .
GeneIDi 8614129.
KEGGi sad:SAAV_1382.
PATRICi 32446811. VBIStaAur139507_1380.

Phylogenomic databases

eggNOGi COG0787.
HOGENOMi HOG000280025.
KOi K01775.
OMAi AYHYGLE.
OrthoDBi EOG6PP9NJ.

Enzyme and pathway databases

UniPathwayi UPA00042 ; UER00497 .
BioCyci SAUR681288:GJ8Z-1363-MONOMER.

Family and domain databases

Gene3Di 2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
HAMAPi MF_01201. Ala_racemase.
InterProi IPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR029066. PLP-binding_barrel.
[Graphical view ]
Pfami PF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view ]
PRINTSi PR00992. ALARACEMASE.
SMARTi SM01005. Ala_racemase_C. 1 hit.
[Graphical view ]
SUPFAMi SSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ED98Imported.

Entry informationi

Entry nameiD0K4X4_STAAD
AccessioniPrimary (citable) accession number: D0K4X4
Entry historyi
Integrated into UniProtKB/TrEMBL: December 15, 2009
Last sequence update: December 15, 2009
Last modified: July 9, 2014
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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