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D0K482 (D0K482_STAAD) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 23. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Superantigen-like protein EMBL ACY11042.1
Gene names
Ordered Locus Names:SAAV_1134 EMBL ACY11042.1
OrganismStaphylococcus aureus (strain ED98) [Complete proteome] [HAMAP] EMBL ACY11042.1
Taxonomic identifier681288 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Bacilli › Bacillales › Staphylococcus ›

Protein attributes

Sequence length238 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processpathogenesis

Inferred from electronic annotation. Source: InterPro

   Cellular_componentextracellular region

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D0K482 [UniParc].

Last modified December 15, 2009. Version 1.
Checksum: D0B1332930E4A19C

FASTA23827,555
        10         20         30         40         50         60 
MSKNITKNII LTTTLLLLGT VLPQNQKPVF SFYSEAKAYS IGQDETNINE LIKYYTQPHF 

        70         80         90        100        110        120 
SFSNKWLYQY DNGNIYVELK RYSWSAHISL WGAESWGNIN QLKDRYVDVF GLKDKDTDQL 

       130        140        150        160        170        180 
WWSYRETFTG GVTPAAKPSD KTYNLFVQYK DKLQTIIGAH KIYQGNKPVL TLKEIDFRAR 

       190        200        210        220        230 
EALIKNKILY TENRNKGKLK ITGGGNNYTI DLSKRLHSDL ANVYVKNPNK ITVDVLFD

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References

[1]"Recent human-to-poultry host jump, adaptation, and pandemic spread of Staphylococcus aureus."
Lowder B.V., Guinane C.M., Ben Zakour N.L., Weinert L.A., Conway-Morris A., Cartwright R.A., Simpson A.J., Rambaut A., Nuebel U., Fitzgerald J.R.
Proc. Natl. Acad. Sci. U.S.A. 106:19545-19550(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ED98 EMBL ACY11042.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001781 Genomic DNA. Translation: ACY11042.1.
RefSeqYP_003282048.1. NC_013450.1.

3D structure databases

ProteinModelPortalD0K482.
SMRD0K482. Positions 25-238.
ModBaseSearch...

Protein-protein interaction databases

STRING681288.SAAV_1134.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACY11042; ACY11042; SAAV_1134.
GeneID8613887.
KEGGsad:SAAV_1134.
PATRIC32446329. VBIStaAur139507_1140.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGNOG326047.
HOGENOMHOG000279994.
OMAYQGNKPI.

Enzyme and pathway databases

BioCycSAUR681288:GJ8Z-1120-MONOMER.

Family and domain databases

Gene3D3.10.20.120. 1 hit.
InterProIPR006126. Staph/Strept_toxin_CS.
IPR015282. Staph_toxin_DUF1954.
IPR016091. SuperAg_toxin_C.
IPR006123. Toxin_b-grasp_Staph/Strep.
[Graphical view]
PfamPF09199. DUF1954. 1 hit.
PF02876. Stap_Strp_tox_C. 1 hit.
[Graphical view]
SUPFAMSSF54334. Stap/Strep_toxin. 1 hit.
PROSITEPS00278. STAPH_STREP_TOXIN_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD0K482_STAAD
AccessionPrimary (citable) accession number: D0K482
Entry history
Integrated into UniProtKB/TrEMBL: December 15, 2009
Last sequence update: December 15, 2009
Last modified: May 1, 2013
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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