D0K0E3 (D0K0E3_HELP5) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Superoxide dismutase RuleBase RU000414
EC=1.15.1.1 RuleBase RU000414

Gene names

Ordered Locus Names:

HPKB_0994

Organism

Helicobacter pylori (strain 52) [Complete proteome] [HAMAP]

Taxonomic identifier

684950 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › delta/epsilon subdivisions › Epsilonproteobacteria › Campylobacterales › Helicobacteraceae › Helicobacter › Helicobacter pylori

Protein attributes

Sequence length	179 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity. RuleBase RU000414
Catalytic activity	2 superoxide + 2 H+ = O2 + H2O2. RuleBase RU000414
Sequence similarities	Belongs to the iron/manganese superoxide dismutase family. RuleBase RU004477

Ontologies

Keywords
Molecular function	Oxidoreductase RuleBase RU000414
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	superoxide metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	metal ion binding Inferred from electronic annotation. Source: InterPro superoxide dismutase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D0K0E3 [UniParc]. Last modified December 15, 2009. Version 1. Checksum: 0C08A35FF9712A97	FASTA	179	20,515
	10 20 30 40 50 60 MNNLNNLIKG TDFEKSSLFA ILTKSSGGVF NNAAQIYNHD FYWDCLSPKA TALSDELKGA 70 80 90 100 110 120 LEKDFGSLEK FKEDFIKSAT TLFGSGWNWA AYNLDTQKIE IIQTSNAQTP VTDKKVPLLV 130 140 150 160 170 VDVWEHAYYI DHKNARPVYL EKFYGHINWH FVSQCYEWAK KEGLGSVDYY INELVHKKA

References

[1]

"Genome sequence of Helicobacter pylori strain 52." Kim S., Lee W.K., Choi S.H., Kang S., Park H.S., Kim Y.S., Lee S.G., Byun E.Y., Jeong J.E., Park Y.H., Lee E.J., Kim J.S., Ryu B.D., Lee Y.S., Hahn Y., Yeom Y.I., Park S.G., Youn H.S. , Ko G.H., Choi M.B., Park C.H., Lim J.Y., Bae D.W., Song J.Y., Park J.U., Kang H.L., Baik S.C., Cho M.J., Yoo H.S., Rhee K.H. Submitted (JUL-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 52.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001680 Genomic DNA. Translation: ACX99563.1.
RefSeq	YP_005762479.1. NC_017354.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACX99563; ACX99563; HPKB_0994.
GeneID	12341394.
KEGG	hpz:HPKB_0994.
PATRIC	36825642. VBIHelPyl145372_1045.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000013584.
KO	K04564.
OMA	SEETCNY.
Family and domain databases
InterPro	IPR001189. Mn/Fe_SOD. IPR019833. Mn/Fe_SOD_BS. IPR019832. Mn/Fe_SOD_C. IPR019831. Mn/Fe_SOD_N. [Graphical view]
PANTHER	PTHR11404. PTHR11404. 1 hit.
Pfam	PF02777. Sod_Fe_C. 1 hit. PF00081. Sod_Fe_N. 1 hit. [Graphical view]
PIRSF	PIRSF000349. SODismutase. 1 hit.
PRINTS	PR01703. MNSODISMTASE.
SUPFAM	SSF46609. SODismutase. 1 hit. SSF54719. SODismutase. 1 hit.
PROSITE	PS00088. SOD_MN. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D0K0E3_HELP5

Accession

Primary (citable) accession number: D0K0E3

Entry history

Integrated into UniProtKB/TrEMBL:	December 15, 2009
Last sequence update:	December 15, 2009
Last modified:	May 1, 2013
This is version 19 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)