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Protein

Superoxide dismutase

Gene

HPKB_0994

Organism
Helicobacter pylori (strain 52)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

GO - Molecular functioni

  1. metal ion binding Source: InterPro
  2. superoxide dismutase activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotation

Enzyme and pathway databases

BioCyciHPYL684950:GLET-973-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:HPKB_0994Imported
OrganismiHelicobacter pylori (strain 52)Imported
Taxonomic identifieri684950 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaEpsilonproteobacteriaCampylobacteralesHelicobacteraceaeHelicobacter
ProteomesiUP000002568 Componenti: Chromosome

Family & Domainsi

Sequence similaritiesi

Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000013584.
KOiK04564.
OMAiFTEKATT.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D0K0E3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNNLNNLIKG TDFEKSSLFA ILTKSSGGVF NNAAQIYNHD FYWDCLSPKA
60 70 80 90 100
TALSDELKGA LEKDFGSLEK FKEDFIKSAT TLFGSGWNWA AYNLDTQKIE
110 120 130 140 150
IIQTSNAQTP VTDKKVPLLV VDVWEHAYYI DHKNARPVYL EKFYGHINWH
160 170
FVSQCYEWAK KEGLGSVDYY INELVHKKA
Length:179
Mass (Da):20,515
Last modified:December 15, 2009 - v1
Checksum:i0C08A35FF9712A97
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001680 Genomic DNA. Translation: ACX99563.1.
RefSeqiYP_005762479.1. NC_017354.1.

Genome annotation databases

EnsemblBacteriaiACX99563; ACX99563; HPKB_0994.
GeneIDi12341394.
KEGGihpz:HPKB_0994.
PATRICi36825642. VBIHelPyl145372_1045.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001680 Genomic DNA. Translation: ACX99563.1.
RefSeqiYP_005762479.1. NC_017354.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACX99563; ACX99563; HPKB_0994.
GeneIDi12341394.
KEGGihpz:HPKB_0994.
PATRICi36825642. VBIHelPyl145372_1045.

Phylogenomic databases

HOGENOMiHOG000013584.
KOiK04564.
OMAiFTEKATT.

Enzyme and pathway databases

BioCyciHPYL684950:GLET-973-MONOMER.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 52Imported.

Entry informationi

Entry nameiD0K0E3_HELP5
AccessioniPrimary (citable) accession number: D0K0E3
Entry historyi
Integrated into UniProtKB/TrEMBL: December 15, 2009
Last sequence update: December 15, 2009
Last modified: March 4, 2015
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.