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D0K0E3 (D0K0E3_HELP5) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 23. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length179 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity.

Catalytic activity

2 superoxide + 2 H+ = O2 + H2O2.

Sequence similarities

Belongs to the iron/manganese superoxide dismutase family. RuleBase RU004477

Ontologies

Keywords
   Molecular functionOxidoreductase RuleBase RU000414
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functionmetal ion binding

Inferred from electronic annotation. Source: InterPro

superoxide dismutase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D0K0E3 [UniParc].

Last modified December 15, 2009. Version 1.
Checksum: 0C08A35FF9712A97

FASTA17920,515
        10         20         30         40         50         60 
MNNLNNLIKG TDFEKSSLFA ILTKSSGGVF NNAAQIYNHD FYWDCLSPKA TALSDELKGA 

        70         80         90        100        110        120 
LEKDFGSLEK FKEDFIKSAT TLFGSGWNWA AYNLDTQKIE IIQTSNAQTP VTDKKVPLLV 

       130        140        150        160        170 
VDVWEHAYYI DHKNARPVYL EKFYGHINWH FVSQCYEWAK KEGLGSVDYY INELVHKKA 

« Hide

References

[1]"Genome sequence of Helicobacter pylori strain 52."
Kim S., Lee W.K., Choi S.H., Kang S., Park H.S., Kim Y.S., Lee S.G., Byun E.Y., Jeong J.E., Park Y.H., Lee E.J., Kim J.S., Ryu B.D., Lee Y.S., Hahn Y., Yeom Y.I., Park S.G., Youn H.S. expand/collapse author list , Ko G.H., Choi M.B., Park C.H., Lim J.Y., Bae D.W., Song J.Y., Park J.U., Kang H.L., Baik S.C., Cho M.J., Yoo H.S., Rhee K.H.
Submitted (JUL-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 52.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001680 Genomic DNA. Translation: ACX99563.1.
RefSeqYP_005762479.1. NC_017354.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACX99563; ACX99563; HPKB_0994.
GeneID12341394.
KEGGhpz:HPKB_0994.
PATRIC36825642. VBIHelPyl145372_1045.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000013584.
KOK04564.
OMAMETAMTI.

Enzyme and pathway databases

BioCycHPYL684950:GLET-973-MONOMER.

Family and domain databases

InterProIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERPTHR11404. PTHR11404. 1 hit.
PfamPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFPIRSF000349. SODismutase. 1 hit.
PRINTSPR01703. MNSODISMTASE.
SUPFAMSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEPS00088. SOD_MN. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD0K0E3_HELP5
AccessionPrimary (citable) accession number: D0K0E3
Entry history
Integrated into UniProtKB/TrEMBL: December 15, 2009
Last sequence update: December 15, 2009
Last modified: July 9, 2014
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)