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D0JV03

- D0JV03_YERP1

UniProt

D0JV03 - D0JV03_YERP1

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Protein
Submitted name: Periplasmic alpha-amylase
Gene
malS, YPD8_3597
Organism
Yersinia pestis (strain D182038)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. alpha-amylase activity Source: InterPro
  2. calcium ion binding Source: InterPro

GO - Biological processi

  1. alpha-glucan catabolic process Source: InterPro
  2. cellular oligosaccharide catabolic process Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciYPES637385:GLMY-3677-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Periplasmic alpha-amylaseImported
Gene namesi
Name:malSImported
Ordered Locus Names:YPD8_3597Imported
OrganismiYersinia pestis (strain D182038)Imported
Taxonomic identifieri637385 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeYersinia
ProteomesiUP000002567: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. periplasmic space Source: InterPro
Complete GO annotation...

Structurei

3D structure databases

ProteinModelPortaliD0JV03.

Family & Domainsi

Phylogenomic databases

KOiK01176.
OMAiGQNWHSF.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF036917. Alph_amls_MalS. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.

Sequencei

Sequence statusi: Complete.

D0JV03-1 [UniParc]FASTAAdd to Basket

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MKRLTLPLLL VLSPAAMANW SLQHFPAFTE QDSGIFLSSS SLTKGEYPLK    50
FYQDKQCWQP TGPVKLNQML SLQPCQENIA IPWRLFRDGQ YQARIDTRSG 100
TPTLTLSVTA PVAEAVQVVT HVCQRWDGNP VTVDVSKTFA EGEIVRDFYS 150
GQTATVSLGK ITLRPAPESG GLLLLESAQT QQAAPFSWQN ATVYFALTDR 200
FNNGNPANDH SYGRHGDGMQ EIGTFHGGDL AGLTEKLDYL QQLGVNALWI 250
SSPLEQIHGW VGGGTKGDFP HYAYHGYYGL DWTRLDANMG TEQDLRTLVE 300
QAHKRGIRIL FDVVMNHVGY ATLADMQNDQ FGALYLQGDQ QEKTLGKRWS 350
DWTPGSGQTW HSFNDYINFS DKTAWDNWWG KKWIRTDIGD YDTPGYDDLT 400
MSLAFLPDIK TESTQPSGLP VFYRNKPDTA AQEIAGATPR DYMTHWLSQW 450
VRDYGIDGFR VDTAKHVEKP AWQQLKQQSI AALAEWKAAH PEQALDNLPF 500
WMTGEAWGHG VMKSDYYQNG FDAMINFDFQ DQANQALACF SSIESTYNQM 550
AEKLQNFNVL SYLSSHDTRL FFKDDAQQSL AKQQRAGSLL LLAPGAVQIF 600
YGDESGRKFG PTGSDPLQGT RSDMNWSELS GEKGALLAHW QKVSQFRARH 650
PAIGAGVQQS QQTANYYAFS RQHQGDKVLV VWVGDKN 687
Length:687
Mass (Da):77,102
Last modified:December 15, 2009 - v1
Checksum:iEF88234CF29F6036
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001589 Genomic DNA. Translation: ACY64265.1.
RefSeqiYP_005510658.1. NC_017160.1.

Genome annotation databases

EnsemblBacteriaiACY64265; ACY64265; YPD8_3597.
GeneIDi12098120.
KEGGiypx:YPD8_3597.
PATRICi36772627. VBIYerPes93679_4771.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001589 Genomic DNA. Translation: ACY64265.1 .
RefSeqi YP_005510658.1. NC_017160.1.

3D structure databases

ProteinModelPortali D0JV03.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACY64265 ; ACY64265 ; YPD8_3597 .
GeneIDi 12098120.
KEGGi ypx:YPD8_3597.
PATRICi 36772627. VBIYerPes93679_4771.

Phylogenomic databases

KOi K01176.
OMAi GQNWHSF.

Enzyme and pathway databases

BioCyci YPES637385:GLMY-3677-MONOMER.

Family and domain databases

Gene3Di 3.20.20.80. 1 hit.
InterProi IPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
[Graphical view ]
PIRSFi PIRSF036917. Alph_amls_MalS. 1 hit.
SMARTi SM00642. Aamy. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 2 hits.
ProtoNeti Search...

Publicationsi

  1. "Spatial variation of Yersinia pestis from Yunnan Province of China."
    Zhang Z., Hai R., Song Z., Xia L., Liang Y., Cai H., Liang Y., Shen X., Zhang E., Xu J., Yu D., Yu X.J.
    Am. J. Trop. Med. Hyg. 81:714-717(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: D182038Imported.

Entry informationi

Entry nameiD0JV03_YERP1
AccessioniPrimary (citable) accession number: D0JV03
Entry historyi
Integrated into UniProtKB/TrEMBL: December 15, 2009
Last sequence update: December 15, 2009
Last modified: October 16, 2013
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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