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D0JV03

- D0JV03_YERP1

UniProt

D0JV03 - D0JV03_YERP1

Protein
Submitted name:

Periplasmic alpha-amylase

Gene

malS

Organism
Yersinia pestis (strain D182038)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 26 (01 Oct 2014)
      Sequence version 1 (15 Dec 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. alpha-amylase activity Source: InterPro
    2. calcium ion binding Source: InterPro

    GO - Biological processi

    1. alpha-glucan catabolic process Source: InterPro
    2. cellular oligosaccharide catabolic process Source: InterPro

    Enzyme and pathway databases

    BioCyciYPES637385:GLMY-3677-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Periplasmic alpha-amylaseImported
    Gene namesi
    Name:malSImported
    Ordered Locus Names:YPD8_3597Imported
    OrganismiYersinia pestis (strain D182038)Imported
    Taxonomic identifieri637385 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeYersinia
    ProteomesiUP000002567: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. periplasmic space Source: InterPro

    Structurei

    3D structure databases

    ProteinModelPortaliD0JV03.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK01176.
    OMAiGQNWHSF.

    Family and domain databases

    Gene3Di3.20.20.80. 1 hit.
    InterProiIPR014635. A_amylase_MalS.
    IPR015902. Glyco_hydro_13.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    [Graphical view]
    PIRSFiPIRSF036917. Alph_amls_MalS. 1 hit.
    SMARTiSM00642. Aamy. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 2 hits.

    Sequencei

    Sequence statusi: Complete.

    D0JV03-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKRLTLPLLL VLSPAAMANW SLQHFPAFTE QDSGIFLSSS SLTKGEYPLK    50
    FYQDKQCWQP TGPVKLNQML SLQPCQENIA IPWRLFRDGQ YQARIDTRSG 100
    TPTLTLSVTA PVAEAVQVVT HVCQRWDGNP VTVDVSKTFA EGEIVRDFYS 150
    GQTATVSLGK ITLRPAPESG GLLLLESAQT QQAAPFSWQN ATVYFALTDR 200
    FNNGNPANDH SYGRHGDGMQ EIGTFHGGDL AGLTEKLDYL QQLGVNALWI 250
    SSPLEQIHGW VGGGTKGDFP HYAYHGYYGL DWTRLDANMG TEQDLRTLVE 300
    QAHKRGIRIL FDVVMNHVGY ATLADMQNDQ FGALYLQGDQ QEKTLGKRWS 350
    DWTPGSGQTW HSFNDYINFS DKTAWDNWWG KKWIRTDIGD YDTPGYDDLT 400
    MSLAFLPDIK TESTQPSGLP VFYRNKPDTA AQEIAGATPR DYMTHWLSQW 450
    VRDYGIDGFR VDTAKHVEKP AWQQLKQQSI AALAEWKAAH PEQALDNLPF 500
    WMTGEAWGHG VMKSDYYQNG FDAMINFDFQ DQANQALACF SSIESTYNQM 550
    AEKLQNFNVL SYLSSHDTRL FFKDDAQQSL AKQQRAGSLL LLAPGAVQIF 600
    YGDESGRKFG PTGSDPLQGT RSDMNWSELS GEKGALLAHW QKVSQFRARH 650
    PAIGAGVQQS QQTANYYAFS RQHQGDKVLV VWVGDKN 687
    Length:687
    Mass (Da):77,102
    Last modified:December 15, 2009 - v1
    Checksum:iEF88234CF29F6036
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001589 Genomic DNA. Translation: ACY64265.1.
    RefSeqiYP_005510658.1. NC_017160.1.

    Genome annotation databases

    EnsemblBacteriaiACY64265; ACY64265; YPD8_3597.
    GeneIDi12098120.
    KEGGiypx:YPD8_3597.
    PATRICi36772627. VBIYerPes93679_4771.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001589 Genomic DNA. Translation: ACY64265.1 .
    RefSeqi YP_005510658.1. NC_017160.1.

    3D structure databases

    ProteinModelPortali D0JV03.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACY64265 ; ACY64265 ; YPD8_3597 .
    GeneIDi 12098120.
    KEGGi ypx:YPD8_3597.
    PATRICi 36772627. VBIYerPes93679_4771.

    Phylogenomic databases

    KOi K01176.
    OMAi GQNWHSF.

    Enzyme and pathway databases

    BioCyci YPES637385:GLMY-3677-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.80. 1 hit.
    InterProi IPR014635. A_amylase_MalS.
    IPR015902. Glyco_hydro_13.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF036917. Alph_amls_MalS. 1 hit.
    SMARTi SM00642. Aamy. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 2 hits.
    ProtoNeti Search...

    Publicationsi

    1. "Spatial variation of Yersinia pestis from Yunnan Province of China."
      Zhang Z., Hai R., Song Z., Xia L., Liang Y., Cai H., Liang Y., Shen X., Zhang E., Xu J., Yu D., Yu X.J.
      Am. J. Trop. Med. Hyg. 81:714-717(2009) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: D182038Imported.

    Entry informationi

    Entry nameiD0JV03_YERP1
    AccessioniPrimary (citable) accession number: D0JV03
    Entry historyi
    Integrated into UniProtKB/TrEMBL: December 15, 2009
    Last sequence update: December 15, 2009
    Last modified: October 1, 2014
    This is version 26 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3