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D0JRA3 (D0JRA3_YERP1) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 31. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Superoxide dismutase [Cu-Zn] RuleBase RU000393

EC=1.15.1.1 RuleBase RU000393
Gene names
Name:sodC EMBL ACY63629.1
Ordered Locus Names:YPD8_2957 EMBL ACY63629.1
OrganismYersinia pestis (strain D182038) [Complete proteome] [HAMAP] EMBL ACY63629.1
Taxonomic identifier637385 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeYersinia

Protein attributes

Sequence length201 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity. RuleBase RU000393

Catalytic activity

2 superoxide + 2 H+ = O2 + H2O2. RuleBase RU000393

Cofactor

Binds 1 copper ion per subunit By similarity. RuleBase RU000393

Binds 1 zinc ion per subunit By similarity. RuleBase RU000393

Sequence similarities

Belongs to the Cu-Zn superoxide dismutase family. RuleBase RU000393

Sequences

Sequence LengthMass (Da)Tools
D0JRA3 [UniParc].

Last modified December 15, 2009. Version 1.
Checksum: 75D25ABE48BF8DCD

FASTA20120,675
        10         20         30         40         50         60 
MKLSTLLLPV ILYSSATLAA NMAGMNDKAS MNDKASMNDM ASMNGKASMT VKINESLPQG 

        70         80         90        100        110        120 
NGKALGTVTV TETAYGLLFT PHLTGLAPGI HGFHLHEKPS CAPGMKDGKA VPALAAGGHL 

       130        140        150        160        170        180 
DPNKTGVHLG PYNDKGHLGD LPGLVVNADG TATYPVLAPR LKSLSEVKQH ALMIHAGGDN 

       190        200 
YSDHPMPLGG GGARMACGVI E 

« Hide

References

[1]"Spatial variation of Yersinia pestis from Yunnan Province of China."
Zhang Z., Hai R., Song Z., Xia L., Liang Y., Cai H., Liang Y., Shen X., Zhang E., Xu J., Yu D., Yu X.J.
Am. J. Trop. Med. Hyg. 81:714-717(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: D182038 EMBL ACY63629.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001589 Genomic DNA. Translation: ACY63629.1.
RefSeqYP_005510022.1. NC_017160.1.

3D structure databases

ProteinModelPortalD0JRA3.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACY63629; ACY63629; YPD8_2957.
GeneID12096292.
KEGGypx:YPD8_2957.
PATRIC36770903. VBIYerPes93679_3944.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK04565.
OMAITETPYG.

Enzyme and pathway databases

BioCycYPES637385:GLMY-3008-MONOMER.

Family and domain databases

Gene3D2.60.40.200. 1 hit.
InterProIPR018152. SOD_Cu/Zn_BS.
IPR001424. SOD_Cu_Zn_dom.
[Graphical view]
PfamPF00080. Sod_Cu. 1 hit.
[Graphical view]
SUPFAMSSF49329. SSF49329. 1 hit.
PROSITEPS00087. SOD_CU_ZN_1. 1 hit.
PS00332. SOD_CU_ZN_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD0JRA3_YERP1
AccessionPrimary (citable) accession number: D0JRA3
Entry history
Integrated into UniProtKB/TrEMBL: December 15, 2009
Last sequence update: December 15, 2009
Last modified: July 9, 2014
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)