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D0JPC0 (D0JPC0_YERP1) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 25. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:YPD8_0528 EMBL ACY61218.1
OrganismYersinia pestis (strain D182038) [Complete proteome] [HAMAP] EMBL ACY61218.1
Taxonomic identifier637385 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeYersinia

Protein attributes

Sequence length3295 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence LengthMass (Da)Tools
D0JPC0 [UniParc].

Last modified December 15, 2009. Version 1.
Checksum: 312FD349EF696D60

FASTA3,295338,791
        10         20         30         40         50         60 
MNKNLYRIVF NQARGMLMVV ADIAASGRAA SSPSSGVGHT QRRRVSALSP LSFRLLIALG 

        70         80         90        100        110        120 
CISLSAQAAI VADGSAPGNQ QPTIISSANG TPQVNIQTPS SGGVSRNAYR QFDVDNRGVI 

       130        140        150        160        170        180 
LNNGRGVNQT QIAGLVDGNP WLARGEASVI LNEVNSRDPS QLNGYIEVAG RKAQVVIANP 

       190        200        210        220        230        240 
AGITCEGCGF INANRATLTT GQAQLNNGQL TGYDVERGEI VIQGKGLDSR GQDHTDLIAR 

       250        260        270        280        290        300 
SVKVNAGIWA NELNITTGRN QVDAAHQNIN TNAADGRHRP AVAVDVANLG GMYAGKIRLI 

       310        320        330        340        350        360 
GTETGVGVHN AGEIGASAGD IVITADGMLV NRGQISSAQQ LAVNTPSGIE NSGVLYGKGN 

       370        380        390        400        410        420 
TQLTTAGKLS NSGTVAAAGD TLIRAAEVNS SRNSVLGAGI KSDNSAITRG TLDIKARGQL 

       430        440        450        460        470        480 
TAQGKNISGT AQTFNANRID LSGSQTQSGD LTFTTEGGDI DLTGANLFAN RRLSVSTPSL 

       490        500        510        520        530        540 
LRTDKANLFA EQIALDAQAL ANVGGVITQT GLTDFNLNLP GDIDNRDGTL LTRGNFLLQA 

       550        560        570        580        590        600 
EHLTSNSQSL LGAGIQSDGK LAPRGDLNVT TRHALIAQGK TLTAGTLALS GSRLDLTDSL 

       610        620        630        640        650        660 
TQAKYMRLTA TEGDIALTGA TVMAANTLFA DTRQILRSDK AYLTADQINL TAYSLSNVEG 

       670        680        690        700        710        720 
RVVQKGSGDF RLDLPGYLDN RGGVLLTKGN LALQAERLTS NSQSLLGAGI QADGSKASKG 

       730        740        750        760        770        780 
DLQANTTQAL IAQGQNVAAG TMTLSGSRVD LTGSQTHASN ITITARDGDV TTREATLITP 

       790        800        810        820        830        840 
GTLSMTAVAN PEQTLNNRGG KLHADNIQLN LAKLENSNGE IAAATDLWLR LQSDFIHQAG 

       850        860        870        880        890        900 
ARLTAGRDLL FNSRGALINQ YKLEAGRDMQ LTALSIRNTS ADRNTNADNS SLLAGRGLSL 

       910        920        930        940        950        960 
STDSLFNRGA IYTTGVGQFT VNGNTENIGE IYTEQQLTFT ATGNLANRGV MQTRGEMQLS 

       970        980        990       1000       1010       1020 
AQGDVNNSGM LYSAGDQMRL SIAGNLTNEG KLHVANGEMR LLTEGNLDNR GSLYGAGNSD 

      1030       1040       1050       1060       1070       1080 
ITTQGNAVNT GSVYTQGALQ WLTKGSVRNS ASIAALGDLQ LRANDLLSDN QSLMAAGLKA 

      1090       1100       1110       1120       1130       1140 
DGSRSDSGNL AVSTEQALIA QGQNIAAGSL ALAGSQIDLT GSQTQANAIS LTAKSGDITL 

      1150       1160       1170       1180       1190       1200 
TSAVIKAATQ LLVTQLAATR SSFIPPSSIP PSSTQSSSTQ ASASPSAWLR TDKASLIADQ 

      1210       1220       1230       1240       1250       1260 
LTFDVQALSN LGGVIAQTGA TDFNLNLPGY LDNRGGTILS KGNVAIQAQG LDSDSGSLLG 

      1270       1280       1290       1300       1310       1320 
AGVQSDGKLT NAGDLAVTVR QDLIAHGQSL AAGAMTLTGS GVDLTGSQTQ ARGITITANK 

      1330       1340       1350       1360       1370       1380 
GDVSTQRANI LSLGSLAINA GANAGQTLNN QGGSLQANNI ALNLGQLDNR TGKIAASQDL 

      1390       1400       1410       1420       1430       1440 
VLGLQSDFNI LADSTLQAGR DFSFTTHGAL TNDGQLLAGR KLSTRSNSLL NNGNIRAVQA 

      1450       1460       1470       1480       1490       1500 
DLRASGALTN RGEILTRGGL STDANTLFNS GTLIGATATL NARERITNSG PNALIGATDK 

      1510       1520       1530       1540       1550       1560 
NGTLALLAPV IENSDTVTRT DTAPTTTLLG MGKVILAGGQ DNSGNYSSAA QVLNLSGLIE 

      1570       1580       1590       1600       1610       1620 
SGNDLLVYAK TLTNRRQILT ATTDFIVGDT ETGAAYWTAE NPDIPGGRYT QPPAGGPMNS 

      1630       1640       1650       1660       1670       1680 
DYIGTNYTST VAYNRIDQIS PEAQLLAGGN LTLQVGTLEN NWSKVSAQGV IDLTGVTLQQ 

      1690       1700       1710       1720       1730       1740 
DDWGSQQRLV EQTTSSGEYR YRTYKGKLWG IAWGPEMKLR LNNQYASSIT AKTLTGSGTV 

      1750       1760       1770       1780       1790       1800 
INNTVINNGA APGAIVAPRD RDSTGKNIAV EFNGIALTLP RSGLYQLKTD KGDYAPGPEA 

      1810       1820       1830       1840       1850       1860 
ALSLANISPP SSLDATGPRG VPPPSDDLNR TGLVTPDRAV SGGYLVETHP AFASLNNWKG 

      1870       1880       1890       1900       1910       1920 
SDLYLQQLSS DPSVIHKRLG DNAYEQRLLR DQVLALTGRT VASDYRSEQA QFEQLFAAGV 

      1930       1940       1950       1960       1970       1980 
QYSKAFNLAP GTRLSAEQMA TLTGNIVLME NRDVAGQTVL VPVVYLAGVK PGDLRANGAL 

      1990       2000       2010       2020       2030       2040 
IAAENISLTE VQGFANAGAI SASNNLQISM AKDITLNNRC GLLQAGNHLQ LSTLNSDIDL 

      2050       2060       2070       2080       2090       2100 
TSARLNATNL QLDSGRDVIL RTASDQYSSG NGAVQRTQTI LGPLASLNIS NNAVITAQRD 

      2110       2120       2130       2140       2150       2160 
FIQQGAGINI GKDLQVNTGG DWLLSTVQRS DQISAQYGGG SATSGSLRHL GSEVKVGGAL 

      2170       2180       2190       2200       2210       2220 
SANVDNLTAV GARVNAGTID VRAQNITLSA ATDSLSVTGG SSSKRHTSSV NLYDETLLGS 

      2230       2240       2250       2260       2270       2280 
QLNATGDINL QTVNDITLSA SAVQTDGALK LAAGGDVTLT SQTEQHDEQR NHTGTKKGLL 

      2290       2300       2310       2320       2330       2340 
SSTTTRSEEG RSQTLAVGSM LSAGSIDVSS QNIAVAGSSV VADKDIRLRA QENLTVSTAQ 

      2350       2360       2370       2380       2390       2400 
QSESGSQLFE QKKSGLMSTG GIGVFIGTSR QKTTDQTQTV SHVGSTVGSL TGNVRLEAGN 

      2410       2420       2430       2440       2450       2460 
QLTLHGSDVV AGKDLALTGA DVAISAAENS RSQQYTAESK QRGLTVALSG PVGSAVNTAV 

      2470       2480       2490       2500       2510       2520 
TTAKAAREEN TGRLAGLQGV KAALSGVQAV QAGQLVQAQG GGITEMVGVS VSLGSQKSSS 

      2530       2540       2550       2560       2570       2580 
QQQQEQTQVS GSALTAGNNL SIKASGSDIL IAGSQLKAGG DTRLDAARDV QLLGAANRQK 

      2590       2600       2610       2620       2630       2640 
TDGSNSSRGG SVGVSVGGSG LSVFANANKG QGNERGDGTF WTETTVDSGG MFSLRSGRDT 

      2650       2660       2670       2680       2690       2700 
ALTGAQVSAE TVKADVGRNL TLQSQQDRDN YDAKQSRASG GISVPVAGGG AAVNLSMSRD 

      2710       2720       2730       2740       2750       2760 
RLSSQYDSVQ AQTGIFAGSG GVDIRVGEHT QLDGAVIAST AAADKNTLDT GTLGFSDIKN 

      2770       2780       2790       2800       2810       2820 
KAVFTVEHQG GSLSTGGPVG SDLLSNLGGM VLAGLGNGGY AEGTTQAAVS EGTITVRDTE 

      2830       2840       2850       2860       2870       2880 
NQQQNVDDLS RDTGNANGSI GPIFDKEKEQ NRLKEVQLIG EIGGQALDIA STQGKIIATH 

      2890       2900       2910       2920       2930       2940 
AANDKMKAVK PEDIAAAEKQ WEKAHPGKAA TAEDINQQIY QTAYNQAFNE SGFGTGGPVQ 

      2950       2960       2970       2980       2990       3000 
RGMQAATAAV QGLAGGNMGA ALTGASAPYL AGVIKQSTGD NPAANTMAHA VLGAVTAYAS 

      3010       3020       3030       3040       3050       3060 
GNNALAGAAG AATAELMAPT IISALGWDKN TLTEGQKQAV SALSTLAAGL AGGLTGDSTA 

      3070       3080       3090       3100       3110       3120 
DALAGGQAGK NAVENNLLGG NEFTHTQFVQ KHGADVLSCA DNPSNAACQR GIAENKAYIA 

      3130       3140       3150       3160       3170       3180 
ALATGSVALL PGSSQAMWAL GAGTNAGMQY ADNGKINPVN SVAAGWINVI TMGQGWKGTI 

      3190       3200       3210       3220       3230       3240 
AWNAAGGALI NAINGGDPLT GAITNGTGAG FGYGVGNYVV KPAANTLGKW ITGGWNPKFD 

      3250       3260       3270       3280       3290 
PNLLKYAEVK GQLGISKEML PSKIPSAVGN AGGSLSSEFG SSLIQQKKDA MEDSK 

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References

[1]"Spatial variation of Yersinia pestis from Yunnan Province of China."
Zhang Z., Hai R., Song Z., Xia L., Liang Y., Cai H., Liang Y., Shen X., Zhang E., Xu J., Yu D., Yu X.J.
Am. J. Trop. Med. Hyg. 81:714-717(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: D182038 EMBL ACY61218.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001589 Genomic DNA. Translation: ACY61218.1.
RefSeqYP_005507611.1. NC_017160.1.

3D structure databases

ProteinModelPortalD0JPC0.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACY61218; ACY61218; YPD8_0528.
GeneID12096877.
KEGGypx:YPD8_0528.
PATRIC36764255. VBIYerPes93679_0676.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK15125.
OMAFINTANI.

Family and domain databases

Gene3D2.160.20.10. 1 hit.
InterProIPR010069. Fil_hemagglutn_20-aa_x2_rpt.
IPR008638. Filamn_hemagglutn_N_bac.
IPR025157. Haemagluttinin_rpt.
IPR012334. Pectin_lyas_fold.
IPR011050. Pectin_lyase_fold/virulence.
IPR006914. VENN_dom.
[Graphical view]
PfamPF13332. Fil_haemagg_2. 4 hits.
PF05860. Haemagg_act. 1 hit.
PF04829. PT-VENN. 1 hit.
[Graphical view]
SMARTSM00912. Haemagg_act. 1 hit.
[Graphical view]
SUPFAMSSF51126. Pectin_lyas_like. 1 hit.
TIGRFAMsTIGR01901. adhes_NPXG. 1 hit.
TIGR01731. fil_hemag_20aa. 14 hits.
ProtoNetSearch...

Entry information

Entry nameD0JPC0_YERP1
AccessionPrimary (citable) accession number: D0JPC0
Entry history
Integrated into UniProtKB/TrEMBL: December 15, 2009
Last sequence update: December 15, 2009
Last modified: May 1, 2013
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)