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D0IZV8 (D0IZV8_COMT2) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 30. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Ordered Locus Names:CtCNB1_2815 EMBL ACY33561.1
OrganismComamonas testosteroni (strain CNB-2) [Complete proteome] [HAMAP] EMBL ACY33561.1
Taxonomic identifier688245 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeComamonas

Protein attributes

Sequence length743 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Binds 1 magnesium or manganese ion per subunit By similarity. PIRSR PIRSR009407-3

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Region134 – 1418Substrate binding By similarity PIRSR PIRSR009407-2

Sites

Metal binding3521Magnesium or manganese By similarity PIRSR PIRSR009407-3
Metal binding5511Magnesium or manganese By similarity PIRSR PIRSR009407-3
Metal binding5551Magnesium or manganese By similarity PIRSR PIRSR009407-3
Binding site1471Substrate By similarity PIRSR PIRSR009407-2
Binding site5501Substrate By similarity PIRSR PIRSR009407-2
Site2571Critical for catalysis By similarity
Site4221Critical for catalysis By similarity

Sequences

Sequence LengthMass (Da)Tools
D0IZV8 [UniParc].

Last modified December 15, 2009. Version 1.
Checksum: 02ECB30F7886D652

FASTA74382,151
        10         20         30         40         50         60 
MSTQQPTIIY TLTDEAPRLA TSAFLPVIRA FAAPAGINVE TSDISLAGRI LGEFPDFLTE 

        70         80         90        100        110        120 
AQRAPNNLAE LGKLTLTPEA NIIKLPNISA SVGQLQEAIK ELQGKGYAIP DYPETATTDA 

       130        140        150        160        170        180 
EKDIKARYNK CIGSAVNPVL REGNSDRRAP AAVKNYAKKH PHSMGEWKQW SQTHVSHMEE 

       190        200        210        220        230        240 
GDFYHGEKSM TLDKAREVKM VLETKSGNSI VLKDKVKLQA AEVIDSMFMS KKALCAFYEK 

       250        260        270        280        290        300 
EIEDCRESGI LFSLHVKATM MKVSHPIVFG HCVKIFYKEA FEKHGKLFDQ LGVNVNNGMA 

       310        320        330        340        350        360 
NLYEKIETLP ASQREEIIRD LHKCQEHRPR LAMVDSAKGI TNFHSPNDVI VDASMPAMIR 

       370        380        390        400        410        420 
VGGKMWAADG KPYDCKAVMP ESTFARIYQE VINFCKWHGN FDPKTMGTVP NVGLMAQKAE 

       430        440        450        460        470        480 
EYGSHDKTFE IAEDGVANIV DIATGEVLLS QNVEAGDIWR MCQVKDAPIR DWVKLAVTRA 

       490        500        510        520        530        540 
RNSGMPAVFW LDPYRPHEAE LIKKVQTYLK EYDTNGLEIH ILSQVRAMRY TLERVARGLD 

       550        560        570        580        590        600 
TISVTGNILR DYLTDLFPIL ELGTSAKMLS IVPLMAGGGM YETGAGGSAP KHVQQLVEEN 

       610        620        630        640        650        660 
HLRWDSLGEF LALAVSFEDL GIKENNARAK LLAKTLDEAT GKLLDEDKSP SRRTGELDNR 

       670        680        690        700        710        720 
GSQFYIALYW AQALAAQTED AALAAKFAPL AKSLTENEAK IVAEMKEVQG KAADIGGYYM 

       730        740 
PDVAKLDAVM RPSATFNAAI ASV 

« Hide

References

[1]"The complete genome of Comamonas testosteroni reveals its genetic adaptations to changing environments."
Ma Y.F., Zhang Y., Zhang J.Y., Chen D.W., Zhu Y., Zheng H., Wang S.Y., Jiang C.Y., Zhao G.P., Liu S.J.
Appl. Environ. Microbiol. 75:6812-6819(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CNB-2.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001220 Genomic DNA. Translation: ACY33561.1.
RefSeqYP_003278857.1. NC_013446.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING688245.CtCNB1_2815.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACY33561; ACY33561; CtCNB1_2815.
GeneID8562614.
KEGGctt:CtCNB1_2815.
PATRIC35266682. VBIComTes153857_2994.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2838.
HOGENOMHOG000240860.
KOK00031.
OrthoDBEOG6DVJPP.

Enzyme and pathway databases

BioCycCTES543891:GJCV-2874-MONOMER.

Family and domain databases

Gene3D3.40.718.10. 3 hits.
InterProIPR004436. Isocitrate_DH_NADP_mono.
IPR024084. IsoPropMal-DH-like_dom.
[Graphical view]
PfamPF03971. IDH. 1 hit.
[Graphical view]
PIRSFPIRSF009407. IDH_monmr. 1 hit.
TIGRFAMsTIGR00178. monomer_idh. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD0IZV8_COMT2
AccessionPrimary (citable) accession number: D0IZV8
Entry history
Integrated into UniProtKB/TrEMBL: December 15, 2009
Last sequence update: December 15, 2009
Last modified: November 13, 2013
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)