D0H3A6 (D0H3A6_VIBCL) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Membrane-bound lytic murein transglycosylase D EMBL EEY42504.1

Gene names

ORF Names:

VIJ_000910 EMBL EEY42504.1

Organism

Vibrio cholerae RC27 EMBL EEY42504.1

Taxonomic identifier

675807 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Vibrionales › Vibrionaceae › Vibrio › Vibrio cholerae

Protein attributes

Sequence length	532 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

Ontologies

Gene Ontology (GO)
Biological_process	cell wall macromolecule catabolic process Inferred from electronic annotation. Source: InterPro peptidoglycan metabolic process Inferred from electronic annotation. Source: InterPro
Cellular_component	membrane Inferred from electronic annotation. Source: InterPro
Molecular_function	lytic transglycosylase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D0H3A6 [UniParc]. Last modified December 15, 2009. Version 1. Checksum: C97E888DA7DF64AC	FASTA	532	59,109
	10 20 30 40 50 60 MRVKFSWVLA LLLVGCQSPQ PVDTTTSDDQ AVNPPTQSAT VKKKRKPQTT ATLPAGETES 70 80 90 100 110 120 VEEERVALTP QEQDDVWQRI AMQFKLGIPK DPSVDAQREW FLKNPGHLQA IASRAEPFLY 130 140 150 160 170 180 LITEKVEQRG LPLELVLLPI VESSFDPFAY SHGSAAGLWQ FISSTGKRYG LKQNFWYDGR 190 200 210 220 230 240 RDVAAATDAA LDYLTVLNQH FDGDWYHAIA AYNSGEGRVA RAIKANKKAG KPIDFFSLDL 250 260 270 280 290 300 PKETSGYVPK LIALADVIAN QEKYGISIPA IENRPVLATV DPKEQLDLAI AARYAGLTVK 310 320 330 340 350 360 ELQSFNPAYN QWATAPNGPH QLLIPVEKVE RFNLAMEENR GKGIKVVRYK VKSGDTLSTI 370 380 390 400 410 420 ADKYNTTAKV IKEANQIASN QIRVGSYLFV PTSVKDEKAY ALSVSNRLAK TQSVPRGQYQ 430 440 450 460 470 480 LTHTVNSGES LWTIAKQYNV PYQSLAKWNG MAPKDALRKG QKLVIWKDSK PTSGVIRTVT 490 500 510 520 530 YKVRSGDTLS GIANKFKVKT ADIVKWNDLN STQYLKAGQQ LKLYVDVTKF SA

References

[1]

Los Alamos National Laboratory (LANL), National Microbial Pathogen Data Resource (NMPDR) Munk A.C., Tapia R., Green L., Rogers Y., Detter J.C., Bruce D., Brettin T.S., Colwell R.R., Huq A., Grim C.J., Hasan N.A., Bartels D., Vonstein V. Submitted (OCT-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: RC27 EMBL EEY42504.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	ADAI01000030 Genomic DNA. Translation: EEY42504.1.
3D structure databases
ProteinModelPortal	D0H3A6.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EEY42504; EEY42504; VIJ_000910.
PATRIC	36141044. VBIVibCho146253_0948.
Family and domain databases
InterPro	IPR023346. Lysozyme-like_dom. IPR008258. Lytic_TGlycosylase-like_cat. IPR010511. MltD_lipid-attach. IPR018392. Peptidoglycan-bd_lysin. IPR002482. Peptidoglycan-bd_Lysin_subgr. IPR000189. Transglyc_AS. [Graphical view]
Pfam	PF01476. LysM. 3 hits. PF06474. MLTD_N. 1 hit. PF01464. SLT. 1 hit. [Graphical view]
SMART	SM00257. LysM. 3 hits. [Graphical view]
SUPFAM	SSF53955. SSF53955. 1 hit.
PROSITE	PS00922. TRANSGLYCOSYLASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D0H3A6_VIBCL

Accession

Primary (citable) accession number: D0H3A6

Entry history

Integrated into UniProtKB/TrEMBL:	December 15, 2009
Last sequence update:	December 15, 2009
Last modified:	April 3, 2013
This is version 15 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)