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Protein

Superoxide dismutase

Gene

sodA

Organism
Erwinia pyrifoliae (strain Ep1/96)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

GO - Molecular functioni

  1. metal ion binding Source: InterPro
  2. superoxide dismutase activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotationImported

Enzyme and pathway databases

BioCyciEPYR634499:GJIP-3740-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Name:sodAImported
Ordered Locus Names:EpC_36430Imported
OrganismiErwinia pyrifoliae (strain Ep1/96)Imported
Taxonomic identifieri634499 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeErwinia
ProteomesiUP000007061: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi634499.EpC_36430.

Family & Domainsi

Sequence similaritiesi

Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000013583.
KOiK04564.
OMAiKHHNAYT.
OrthoDBiEOG63NMNT.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D0FXM8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSYTLPSLPY AYDALEPHFD KQTMEIHHTK HHQAYVNNAN AALEGTEFAN
60 70 80 90 100
LPVEELIAKL DQLPADKKGP LRNNAGGHAN HSFFWKGLKT GTSLGGDLKA
110 120 130 140 150
AIEKDFGSVD AFKAEFEKAA TTRFGSGWAW LVKKGDKLAV VSTANQDSPL
160 170 180 190 200
MGEAISGASG TPIVGLDVWE HAYYLKYQNK RPDYIKAFWD VVNWDQAAAN

FAAAK
Length:205
Mass (Da):22,514
Last modified:November 24, 2009 - v1
Checksum:iC2AE9914B008F9CA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FP236842 Genomic DNA. Translation: CAX57423.1.
RefSeqiYP_002650624.1. NC_012214.1.

Genome annotation databases

EnsemblBacteriaiCAX57423; CAX57423; EpC_36430.
GeneIDi8541171.
KEGGiepy:EpC_36430.
PATRICi20425363. VBIErwPyr67807_3547.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FP236842 Genomic DNA. Translation: CAX57423.1.
RefSeqiYP_002650624.1. NC_012214.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi634499.EpC_36430.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAX57423; CAX57423; EpC_36430.
GeneIDi8541171.
KEGGiepy:EpC_36430.
PATRICi20425363. VBIErwPyr67807_3547.

Phylogenomic databases

HOGENOMiHOG000013583.
KOiK04564.
OMAiKHHNAYT.
OrthoDBiEOG63NMNT.

Enzyme and pathway databases

BioCyciEPYR634499:GJIP-3740-MONOMER.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome comparison of the epiphytic bacteria Erwinia billingiae and E. tasmaniensis with the pear pathogen E. pyrifoliae."
    Kube M., Migdoll A.M., Gehring I., Heitmann K., Mayer Y., Kuhl H., Knaust F., Geider K., Reinhardt R.
    BMC Genomics 11:393-393(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Ep1/96Imported.

Entry informationi

Entry nameiD0FXM8_ERWPE
AccessioniPrimary (citable) accession number: D0FXM8
Entry historyi
Integrated into UniProtKB/TrEMBL: November 24, 2009
Last sequence update: November 24, 2009
Last modified: January 7, 2015
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.