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D0FX28 (D0FX28_ERWPE) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 24. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:glpD EMBL CAX57222.1
Ordered Locus Names:EpC_34430 EMBL CAX57222.1
OrganismErwinia pyrifoliae (strain Ep1/96) [Complete proteome] [HAMAP]
Taxonomic identifier634499 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeErwinia

Protein attributes

Sequence length501 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

FAD By similarity.

Sequence similarities

Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. RuleBase RU003891

Sequences

Sequence LengthMass (Da)Tools
D0FX28 [UniParc].

Last modified November 24, 2009. Version 1.
Checksum: D72AA9F688EA5ADF

FASTA50156,394
        10         20         30         40         50         60 
METKDLIVIG GGINGAGIAA DAAGRGLSVL MLEAQDLACA TSSASSKLIH GGLRYLEHYE 

        70         80         90        100        110        120 
FRLVGEALAE REVLLKMAPH IAFPMRFLLP HRPHLRPAWM IRMGLFMYDH LGKRTSLPGS 

       130        140        150        160        170        180 
KSVLFGSDSI LKPEIVRGFE YSDCWVDDAR LVVLNAQEVE KRGGTVRTRT RVTRARRENG 

       190        200        210        220        230        240 
LWIVEAEDID SGKIFTWRAK GLVNAAGPWV KQLFDDGLKL KSPYGIRLIK GSHIVVPRIG 

       250        260        270        280        290        300 
SQKQAYILQN EDNRIVFVIP WMDEFSIIGT TDVEYKGDAH NVKIDDNEID YLLKVFNAHF 

       310        320        330        340        350        360 
KQDLSRDDIV WSYSGVRPLC DDESDSPQAI TRDYTLDVHD DGGQAPLLSV FGGKLTTYRK 

       370        380        390        400        410        420 
LAEHAMEKLS KYYPHAGAAW TKSCVLPGGN FAGTREEYAV SLRRRFPFIS VELARHYART 

       430        440        450        460        470        480 
YGSNSEQLLK GATSLADLGE LFGHHFYEAE LRYLVENEWV RATDDAIWRR TKEGMWLNEA 

       490        500 
QQSRIGEWLA QHAKPLLSLA S 

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References

[1]"Genome comparison of the epiphytic bacteria Erwinia billingiae and E. tasmaniensis with the pear pathogen E. pyrifoliae."
Kube M., Migdoll A.M., Gehring I., Heitmann K., Mayer Y., Kuhl H., Knaust F., Geider K., Reinhardt R.
BMC Genomics 11:393-393(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Ep1/96 EMBL CAX57222.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FP236842 Genomic DNA. Translation: CAX57222.1.
RefSeqYP_002650424.1. NC_012214.1.

3D structure databases

ProteinModelPortalD0FX28.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING634499.EpC_34430.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAX57222; CAX57222; EpC_34430.
GeneID8539289.
KEGGepy:EpC_34430.
PATRIC20424993. VBIErwPyr67807_3361.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000004811.
KOK00111.
OMAHAMEKLS.
OrthoDBEOG651SR7.

Enzyme and pathway databases

BioCycEPYR634499:GJIP-3540-MONOMER.

Family and domain databases

InterProIPR006076. FAD-dep_OxRdtase.
IPR000447. G3P_DH_FAD-dep.
[Graphical view]
PfamPF01266. DAO. 1 hit.
[Graphical view]
PRINTSPR01001. FADG3PDH.
PROSITEPS00977. FAD_G3PDH_1. 1 hit.
PS00978. FAD_G3PDH_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD0FX28_ERWPE
AccessionPrimary (citable) accession number: D0FX28
Entry history
Integrated into UniProtKB/TrEMBL: November 24, 2009
Last sequence update: November 24, 2009
Last modified: November 13, 2013
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)