D0FU90 (D0FU90_ERWPE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Succinate dehydrogenase flavoprotein subunit EMBL CAX56219.1

Gene names

Name:	sdhA EMBL CAX56219.1
Ordered Locus Names:	EpC_24400 EMBL CAX56219.1

Organism

Erwinia pyrifoliae (strain Ep1/96) [Complete proteome] [HAMAP]

Taxonomic identifier

634499 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Erwinia › Erwinia pyrifoliae

Protein attributes

Sequence length	588 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	electron transport chain Inferred from electronic annotation. Source: InterPro tricarboxylic acid cycle Inferred from electronic annotation. Source: InterPro
Molecular_function	flavin adenine dinucleotide binding Inferred from electronic annotation. Source: InterPro oxidoreductase activity, acting on the CH-CH group of donors Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D0FU90 [UniParc]. Last modified November 24, 2009. Version 1. Checksum: E3A2558D9DA29ABC	FASTA	588	64,363
	10 20 30 40 50 60 MKLPVREFDA VVIGAGGAGM RAALQISQSG QTCALLSKVF PTRSHTVSAQ GGITVALGNT 70 80 90 100 110 120 HEDNWEWHMY DTVKGSDYIG DQDAIEYMCK TGPEAILELE HMGLPFSRLD DGRIYQRPFG 130 140 150 160 170 180 GQSKNFGGEQ AARTAAAADR TGHALLHTLY QQNLKNKTTI FSEWYALDLV KNVDGAIVGC 190 200 210 220 230 240 TALNIEDGEV VYFKARATVL ATGGAGRIYQ STTNAHINTG DGVGMALRAG VPVQDMEMWQ 250 260 270 280 290 300 FHPTGIAGAG VLVTEGCRGE GGYLLNKHGE RFMERYAPNA KDLAGRDVVA RSIMIEIREG 310 320 330 340 350 360 RGCDGPWGPH AKLKLDHLGK EVLESRLPGI LELSRTFAHV DPVKEPIPVI PTCHYMMGGI 370 380 390 400 410 420 PTKVSGQALT VNEQGEDVVI PGLFAVGEIA CVSVHGANRL GGNSLLDLVV FGRAAGLHLQ 430 440 450 460 470 480 ESIQQQGALL DATEEEIEAS LTRLNRWNNN INGEDPAELR KALQACMQHN FSVFREGDAM 490 500 510 520 530 540 AKGLAELKVL RERLKNARLD DRSSDFNTQR VECLELDNLM ETAYATAVSA NFRTESRGAH 550 560 570 580 SRFDYPERDD ANWLCHSLYL PQSESMTRRE VNMQPKLRAA FPPKARTY

References

[1]

"Genome comparison of the epiphytic bacteria Erwinia billingiae and E. tasmaniensis with the pear pathogen E. pyrifoliae." Kube M., Migdoll A.M., Gehring I., Heitmann K., Mayer Y., Kuhl H., Knaust F., Geider K., Reinhardt R. BMC Genomics 11:393-393(2010) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Ep1/96.

Cross-references

Sequence databases
EMBL GenBank DDBJ	FP236842 Genomic DNA. Translation: CAX56219.1.
RefSeq	YP_002649436.1. NC_012214.1.
3D structure databases
ProteinModelPortal	D0FU90.
ModBase	Search...
Protein-protein interaction databases
STRING	634499.EpC_24400.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CAX56219; CAX56219; EpC_24400.
GeneID	8540602.
KEGG	epy:EpC_24400.
PATRIC	20423074. VBIErwPyr67807_2422.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000160475.
KO	K00239.
OMA	VGCTAID.
Enzyme and pathway databases
BioCyc	EPYR634499:GJIP-2510-MONOMER.
Family and domain databases
Gene3D	1.20.58.100. 1 hit.
InterPro	IPR003953. FAD_bind_dom. IPR013027. FAD_pyr_nucl-diS_OxRdtase. IPR003952. FRD_SDH_FAD_BS. IPR015939. Fum_Rdtase/Succ_DH_flav-like_C. IPR011281. Succ_DH_flav_su_fwd. IPR014006. Succ_Dhase_FrdA_Gneg. [Graphical view]
PANTHER	PTHR11632:SF5. PTHR11632:SF5. 1 hit.
Pfam	PF00890. FAD_binding_2. 1 hit. PF02910. Succ_DH_flav_C. 1 hit. [Graphical view]
PRINTS	PR00368. FADPNR.
SUPFAM	SSF46977. Succ_DH_flav_C. 1 hit.
TIGRFAMs	TIGR01816. sdhA_forward. 1 hit. TIGR01812. sdhA_frdA_Gneg. 1 hit.
PROSITE	PS00504. FRD_SDH_FAD_BINDING. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D0FU90_ERWPE

Accession

Primary (citable) accession number: D0FU90

Entry history

Integrated into UniProtKB/TrEMBL:	November 24, 2009
Last sequence update:	November 24, 2009
Last modified:	May 1, 2013
This is version 23 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)