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D0FU90

- D0FU90_ERWPE

UniProt

D0FU90 - D0FU90_ERWPE

Protein
Submitted name:

Succinate dehydrogenase flavoprotein subunit

Gene

sdhA

Organism
Erwinia pyrifoliae (strain Ep1/96)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 29 (01 Oct 2014)
      Sequence version 1 (24 Nov 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. flavin adenine dinucleotide binding Source: InterPro
    2. oxidoreductase activity, acting on the CH-CH group of donors Source: InterPro

    GO - Biological processi

    1. electron transport chain Source: InterPro
    2. tricarboxylic acid cycle Source: InterPro

    Enzyme and pathway databases

    BioCyciEPYR634499:GJIP-2510-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Succinate dehydrogenase flavoprotein subunitImported
    Gene namesi
    Name:sdhAImported
    Ordered Locus Names:EpC_24400Imported
    OrganismiErwinia pyrifoliae (strain Ep1/96)Imported
    Taxonomic identifieri634499 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeErwinia
    ProteomesiUP000007061: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi634499.EpC_24400.

    Structurei

    3D structure databases

    ProteinModelPortaliD0FU90.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000160475.
    KOiK00239.
    OMAiRTEQGRI.
    OrthoDBiEOG6M3PC4.

    Family and domain databases

    Gene3Di1.20.58.100. 1 hit.
    3.90.700.10. 1 hit.
    InterProiIPR003953. FAD_bind_dom.
    IPR013027. FAD_pyr_nucl-diS_OxRdtase.
    IPR003952. FRD_SDH_FAD_BS.
    IPR015939. Fum_Rdtase/Succ_DH_flav-like_C.
    IPR027477. Succ_DH/fumarate_Rdtase_cat.
    IPR011281. Succ_DH_flav_su_fwd.
    IPR014006. Succ_Dhase_FrdA_Gneg.
    [Graphical view]
    PfamiPF00890. FAD_binding_2. 1 hit.
    PF02910. Succ_DH_flav_C. 1 hit.
    [Graphical view]
    PRINTSiPR00368. FADPNR.
    SUPFAMiSSF46977. SSF46977. 1 hit.
    SSF56425. SSF56425. 1 hit.
    TIGRFAMsiTIGR01816. sdhA_forward. 1 hit.
    TIGR01812. sdhA_frdA_Gneg. 1 hit.
    PROSITEiPS00504. FRD_SDH_FAD_BINDING. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    D0FU90-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKLPVREFDA VVIGAGGAGM RAALQISQSG QTCALLSKVF PTRSHTVSAQ    50
    GGITVALGNT HEDNWEWHMY DTVKGSDYIG DQDAIEYMCK TGPEAILELE 100
    HMGLPFSRLD DGRIYQRPFG GQSKNFGGEQ AARTAAAADR TGHALLHTLY 150
    QQNLKNKTTI FSEWYALDLV KNVDGAIVGC TALNIEDGEV VYFKARATVL 200
    ATGGAGRIYQ STTNAHINTG DGVGMALRAG VPVQDMEMWQ FHPTGIAGAG 250
    VLVTEGCRGE GGYLLNKHGE RFMERYAPNA KDLAGRDVVA RSIMIEIREG 300
    RGCDGPWGPH AKLKLDHLGK EVLESRLPGI LELSRTFAHV DPVKEPIPVI 350
    PTCHYMMGGI PTKVSGQALT VNEQGEDVVI PGLFAVGEIA CVSVHGANRL 400
    GGNSLLDLVV FGRAAGLHLQ ESIQQQGALL DATEEEIEAS LTRLNRWNNN 450
    INGEDPAELR KALQACMQHN FSVFREGDAM AKGLAELKVL RERLKNARLD 500
    DRSSDFNTQR VECLELDNLM ETAYATAVSA NFRTESRGAH SRFDYPERDD 550
    ANWLCHSLYL PQSESMTRRE VNMQPKLRAA FPPKARTY 588
    Length:588
    Mass (Da):64,363
    Last modified:November 24, 2009 - v1
    Checksum:iE3A2558D9DA29ABC
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FP236842 Genomic DNA. Translation: CAX56219.1.
    RefSeqiWP_012668714.1. NC_012214.1.
    YP_002649436.1. NC_012214.1.

    Genome annotation databases

    EnsemblBacteriaiCAX56219; CAX56219; EpC_24400.
    GeneIDi8540602.
    KEGGiepy:EpC_24400.
    PATRICi20423074. VBIErwPyr67807_2422.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FP236842 Genomic DNA. Translation: CAX56219.1 .
    RefSeqi WP_012668714.1. NC_012214.1.
    YP_002649436.1. NC_012214.1.

    3D structure databases

    ProteinModelPortali D0FU90.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 634499.EpC_24400.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAX56219 ; CAX56219 ; EpC_24400 .
    GeneIDi 8540602.
    KEGGi epy:EpC_24400.
    PATRICi 20423074. VBIErwPyr67807_2422.

    Phylogenomic databases

    HOGENOMi HOG000160475.
    KOi K00239.
    OMAi RTEQGRI.
    OrthoDBi EOG6M3PC4.

    Enzyme and pathway databases

    BioCyci EPYR634499:GJIP-2510-MONOMER.

    Family and domain databases

    Gene3Di 1.20.58.100. 1 hit.
    3.90.700.10. 1 hit.
    InterProi IPR003953. FAD_bind_dom.
    IPR013027. FAD_pyr_nucl-diS_OxRdtase.
    IPR003952. FRD_SDH_FAD_BS.
    IPR015939. Fum_Rdtase/Succ_DH_flav-like_C.
    IPR027477. Succ_DH/fumarate_Rdtase_cat.
    IPR011281. Succ_DH_flav_su_fwd.
    IPR014006. Succ_Dhase_FrdA_Gneg.
    [Graphical view ]
    Pfami PF00890. FAD_binding_2. 1 hit.
    PF02910. Succ_DH_flav_C. 1 hit.
    [Graphical view ]
    PRINTSi PR00368. FADPNR.
    SUPFAMi SSF46977. SSF46977. 1 hit.
    SSF56425. SSF56425. 1 hit.
    TIGRFAMsi TIGR01816. sdhA_forward. 1 hit.
    TIGR01812. sdhA_frdA_Gneg. 1 hit.
    PROSITEi PS00504. FRD_SDH_FAD_BINDING. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genome comparison of the epiphytic bacteria Erwinia billingiae and E. tasmaniensis with the pear pathogen E. pyrifoliae."
      Kube M., Migdoll A.M., Gehring I., Heitmann K., Mayer Y., Kuhl H., Knaust F., Geider K., Reinhardt R.
      BMC Genomics 11:393-393(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Ep1/96Imported.

    Entry informationi

    Entry nameiD0FU90_ERWPE
    AccessioniPrimary (citable) accession number: D0FU90
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 24, 2009
    Last sequence update: November 24, 2009
    Last modified: October 1, 2014
    This is version 29 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3