D0FU88 (D0FU88_ERWPE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
2-oxoglutarate dehydrogenase E1 component EMBL CAX56217.1
EC=1.2.4.2 EMBL CAX56217.1

Gene names

Name:	sucA EMBL CAX56217.1
Ordered Locus Names:	EpC_24380 EMBL CAX56217.1

Organism

Erwinia pyrifoliae (strain Ep1/96) [Complete proteome] [HAMAP]

Taxonomic identifier

634499 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Erwinia › Erwinia pyrifoliae

Protein attributes

Sequence length	935 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Oxidoreductase EMBL CAX56217.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	tricarboxylic acid cycle Inferred from electronic annotation. Source: InterPro
Molecular_function	oxoglutarate dehydrogenase (succinyl-transferring) activity Inferred from electronic annotation. Source: EC thiamine pyrophosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D0FU88 [UniParc]. Last modified November 24, 2009. Version 1. Checksum: 1E78DA2B250BA83E	FASTA	935	104,861
	10 20 30 40 50 60 MQNSAMKPWL DSSWLAGANQ SYIEQLYEDF LTDPDSVDVA WKSLFQQLPG TGVRPEQIHS 70 80 90 100 110 120 TTREYFRRLA KDASRYTASV SDPETNARQV KVLQMINAFR FRGHQQANLD PLGLWKQESV 130 140 150 160 170 180 ADLDPGYHGL SDADFEESFN VGSFASGKET MKLADLYAAL KQTYCGSIGA EYMHITNTDE 190 200 210 220 230 240 KRWIQQRLES VLGQVSYSVE EKKGFLKQLT AAEGLERYLG AKFPGAKRFS LEGGDALVPM 250 260 270 280 290 300 LNEMIRHAGK SGTREVVLGM AHRGRLNVLI NVLGKKPQDL FDEFSGKHKE HLGTGDVKYH 310 320 330 340 350 360 MGFSSDVETE GGMVHLALAF NPSHLEIVSP VVMGSVRARL DRLDQPGSNK VLPITIHGDA 370 380 390 400 410 420 AVIGQGVVQE TLNMSEARGY EVGGTVRIVI NNQIGFTTSN PKDARSTQYC TDIGKMVMAP 430 440 450 460 470 480 IFHVNADDPE AVAFVTRLAL DFRNTFKRDV FIDLVCYRRH GHNEADEPSA TQPVMYQKIK 490 500 510 520 530 540 KHPTPRKIYA DKLEAAQVAS LEDATEMVNL YRDALDAGEC VVPEWRPMSL HSFTWSPYLN 550 560 570 580 590 600 HDWDESYPER IELKRLQELA KRISTVPEAV EMQSRVTKIY NDRAEMAAGN KPFDWGAAEN 610 620 630 640 650 660 LAYATLVDEG IPCRLSGEDM GRGTFFHRHA VIHNQSNGST YTPLQHVHNG QGAFKVWDSV 670 680 690 700 710 720 LSEEAVLAFE YGYATAEPRT LTIWEAQFGD FANGAQVVID QFISSGEQKW GRMCGLVMLL 730 740 750 760 770 780 PHGYEGQGPE HSSARLERYL QLCAEQNMQV CVPSTPAQVY HMLRRQALRG MRRPLVVMSP 790 800 810 820 830 840 KSLLRHPLAV SSLEELANGA FQPAIGEIDA LDAKSVKRVV LCSGKVYYDL LDKRRKNEQT 850 860 870 880 890 900 DVAIVRIEQL YPFPHKAVQD VLKQYSHVHD FVWCQEEPLN QGAWYCSQHH FREIVPFGAS 910 920 930 LRYAGRPASA SPAVGYMSVH QQQQQDLVND ALNVE

References

[1]

"Genome comparison of the epiphytic bacteria Erwinia billingiae and E. tasmaniensis with the pear pathogen E. pyrifoliae." Kube M., Migdoll A.M., Gehring I., Heitmann K., Mayer Y., Kuhl H., Knaust F., Geider K., Reinhardt R. BMC Genomics 11:393-393(2010) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Ep1/96.

Cross-references

Sequence databases
EMBL GenBank DDBJ	FP236842 Genomic DNA. Translation: CAX56217.1.
RefSeq	YP_002649434.1. NC_012214.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	634499.EpC_24380.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CAX56217; CAX56217; EpC_24380.
GeneID	8538469.
KEGG	epy:EpC_24380.
PATRIC	20423070. VBIErwPyr67807_2420.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000259588.
KO	K00164.
OMA	IIKRGGA.
Enzyme and pathway databases
BioCyc	EPYR634499:GJIP-2508-MONOMER.
Family and domain databases
InterPro	IPR011603. 2oxoglutarate_DH_E1. IPR001017. DH_E1. IPR005475. Transketolase-like_Pyr-bd. [Graphical view]
PANTHER	PTHR23152. PTHR23152. 1 hit.
Pfam	PF00676. E1_dh. 1 hit. PF02779. Transket_pyr. 1 hit. [Graphical view]
PIRSF	PIRSF000157. Oxoglu_dh_E1. 1 hit.
SMART	SM00861. Transket_pyr. 1 hit. [Graphical view]
TIGRFAMs	TIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNet	Search...

Entry information

Entry name

D0FU88_ERWPE

Accession

Primary (citable) accession number: D0FU88

Entry history

Integrated into UniProtKB/TrEMBL:	November 24, 2009
Last sequence update:	November 24, 2009
Last modified:	May 1, 2013
This is version 18 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)