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D0FU88

- D0FU88_ERWPE

UniProt

D0FU88 - D0FU88_ERWPE

Protein
Submitted name:

2-oxoglutarate dehydrogenase E1 component

Gene

sucA

Organism
Erwinia pyrifoliae (strain Ep1/96)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 23 (01 Oct 2014)
      Sequence version 1 (24 Nov 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. oxoglutarate dehydrogenase (succinyl-transferring) activity Source: UniProtKB-EC
    2. thiamine pyrophosphate binding Source: InterPro

    GO - Biological processi

    1. tricarboxylic acid cycle Source: InterPro

    Keywords - Molecular functioni

    OxidoreductaseImported

    Enzyme and pathway databases

    BioCyciEPYR634499:GJIP-2508-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    2-oxoglutarate dehydrogenase E1 componentImported (EC:1.2.4.2Imported)
    Gene namesi
    Name:sucAImported
    Ordered Locus Names:EpC_24380Imported
    OrganismiErwinia pyrifoliae (strain Ep1/96)Imported
    Taxonomic identifieri634499 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeErwinia
    ProteomesiUP000007061: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi634499.EpC_24380.

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000259588.
    KOiK00164.
    OMAiGHQNANL.
    OrthoDBiEOG6V1M1F.

    Family and domain databases

    Gene3Di3.40.50.970. 2 hits.
    InterProiIPR011603. 2oxoglutarate_DH_E1.
    IPR001017. DH_E1.
    IPR029061. THDP-binding.
    IPR005475. Transketolase-like_Pyr-bd.
    [Graphical view]
    PANTHERiPTHR23152. PTHR23152. 1 hit.
    PfamiPF00676. E1_dh. 1 hit.
    PF02779. Transket_pyr. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
    SMARTiSM00861. Transket_pyr. 1 hit.
    [Graphical view]
    SUPFAMiSSF52518. SSF52518. 2 hits.
    TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    D0FU88-1 [UniParc]FASTAAdd to Basket

    « Hide

    MQNSAMKPWL DSSWLAGANQ SYIEQLYEDF LTDPDSVDVA WKSLFQQLPG    50
    TGVRPEQIHS TTREYFRRLA KDASRYTASV SDPETNARQV KVLQMINAFR 100
    FRGHQQANLD PLGLWKQESV ADLDPGYHGL SDADFEESFN VGSFASGKET 150
    MKLADLYAAL KQTYCGSIGA EYMHITNTDE KRWIQQRLES VLGQVSYSVE 200
    EKKGFLKQLT AAEGLERYLG AKFPGAKRFS LEGGDALVPM LNEMIRHAGK 250
    SGTREVVLGM AHRGRLNVLI NVLGKKPQDL FDEFSGKHKE HLGTGDVKYH 300
    MGFSSDVETE GGMVHLALAF NPSHLEIVSP VVMGSVRARL DRLDQPGSNK 350
    VLPITIHGDA AVIGQGVVQE TLNMSEARGY EVGGTVRIVI NNQIGFTTSN 400
    PKDARSTQYC TDIGKMVMAP IFHVNADDPE AVAFVTRLAL DFRNTFKRDV 450
    FIDLVCYRRH GHNEADEPSA TQPVMYQKIK KHPTPRKIYA DKLEAAQVAS 500
    LEDATEMVNL YRDALDAGEC VVPEWRPMSL HSFTWSPYLN HDWDESYPER 550
    IELKRLQELA KRISTVPEAV EMQSRVTKIY NDRAEMAAGN KPFDWGAAEN 600
    LAYATLVDEG IPCRLSGEDM GRGTFFHRHA VIHNQSNGST YTPLQHVHNG 650
    QGAFKVWDSV LSEEAVLAFE YGYATAEPRT LTIWEAQFGD FANGAQVVID 700
    QFISSGEQKW GRMCGLVMLL PHGYEGQGPE HSSARLERYL QLCAEQNMQV 750
    CVPSTPAQVY HMLRRQALRG MRRPLVVMSP KSLLRHPLAV SSLEELANGA 800
    FQPAIGEIDA LDAKSVKRVV LCSGKVYYDL LDKRRKNEQT DVAIVRIEQL 850
    YPFPHKAVQD VLKQYSHVHD FVWCQEEPLN QGAWYCSQHH FREIVPFGAS 900
    LRYAGRPASA SPAVGYMSVH QQQQQDLVND ALNVE 935
    Length:935
    Mass (Da):104,861
    Last modified:November 24, 2009 - v1
    Checksum:i1E78DA2B250BA83E
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FP236842 Genomic DNA. Translation: CAX56217.1.
    RefSeqiYP_002649434.1. NC_012214.1.

    Genome annotation databases

    EnsemblBacteriaiCAX56217; CAX56217; EpC_24380.
    GeneIDi8538469.
    KEGGiepy:EpC_24380.
    PATRICi20423070. VBIErwPyr67807_2420.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FP236842 Genomic DNA. Translation: CAX56217.1 .
    RefSeqi YP_002649434.1. NC_012214.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 634499.EpC_24380.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAX56217 ; CAX56217 ; EpC_24380 .
    GeneIDi 8538469.
    KEGGi epy:EpC_24380.
    PATRICi 20423070. VBIErwPyr67807_2420.

    Phylogenomic databases

    HOGENOMi HOG000259588.
    KOi K00164.
    OMAi GHQNANL.
    OrthoDBi EOG6V1M1F.

    Enzyme and pathway databases

    BioCyci EPYR634499:GJIP-2508-MONOMER.

    Family and domain databases

    Gene3Di 3.40.50.970. 2 hits.
    InterProi IPR011603. 2oxoglutarate_DH_E1.
    IPR001017. DH_E1.
    IPR029061. THDP-binding.
    IPR005475. Transketolase-like_Pyr-bd.
    [Graphical view ]
    PANTHERi PTHR23152. PTHR23152. 1 hit.
    Pfami PF00676. E1_dh. 1 hit.
    PF02779. Transket_pyr. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000157. Oxoglu_dh_E1. 1 hit.
    SMARTi SM00861. Transket_pyr. 1 hit.
    [Graphical view ]
    SUPFAMi SSF52518. SSF52518. 2 hits.
    TIGRFAMsi TIGR00239. 2oxo_dh_E1. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Genome comparison of the epiphytic bacteria Erwinia billingiae and E. tasmaniensis with the pear pathogen E. pyrifoliae."
      Kube M., Migdoll A.M., Gehring I., Heitmann K., Mayer Y., Kuhl H., Knaust F., Geider K., Reinhardt R.
      BMC Genomics 11:393-393(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Ep1/96Imported.

    Entry informationi

    Entry nameiD0FU88_ERWPE
    AccessioniPrimary (citable) accession number: D0FU88
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 24, 2009
    Last sequence update: November 24, 2009
    Last modified: October 1, 2014
    This is version 23 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3