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D0FU88 (D0FU88_ERWPE) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 20. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=1.2.4.2 EMBL CAX56217.1
Gene names
Name:sucA EMBL CAX56217.1
Ordered Locus Names:EpC_24380 EMBL CAX56217.1
OrganismErwinia pyrifoliae (strain Ep1/96) [Complete proteome] [HAMAP]
Taxonomic identifier634499 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeErwinia

Protein attributes

Sequence length935 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
D0FU88 [UniParc].

Last modified November 24, 2009. Version 1.
Checksum: 1E78DA2B250BA83E

FASTA935104,861
        10         20         30         40         50         60 
MQNSAMKPWL DSSWLAGANQ SYIEQLYEDF LTDPDSVDVA WKSLFQQLPG TGVRPEQIHS 

        70         80         90        100        110        120 
TTREYFRRLA KDASRYTASV SDPETNARQV KVLQMINAFR FRGHQQANLD PLGLWKQESV 

       130        140        150        160        170        180 
ADLDPGYHGL SDADFEESFN VGSFASGKET MKLADLYAAL KQTYCGSIGA EYMHITNTDE 

       190        200        210        220        230        240 
KRWIQQRLES VLGQVSYSVE EKKGFLKQLT AAEGLERYLG AKFPGAKRFS LEGGDALVPM 

       250        260        270        280        290        300 
LNEMIRHAGK SGTREVVLGM AHRGRLNVLI NVLGKKPQDL FDEFSGKHKE HLGTGDVKYH 

       310        320        330        340        350        360 
MGFSSDVETE GGMVHLALAF NPSHLEIVSP VVMGSVRARL DRLDQPGSNK VLPITIHGDA 

       370        380        390        400        410        420 
AVIGQGVVQE TLNMSEARGY EVGGTVRIVI NNQIGFTTSN PKDARSTQYC TDIGKMVMAP 

       430        440        450        460        470        480 
IFHVNADDPE AVAFVTRLAL DFRNTFKRDV FIDLVCYRRH GHNEADEPSA TQPVMYQKIK 

       490        500        510        520        530        540 
KHPTPRKIYA DKLEAAQVAS LEDATEMVNL YRDALDAGEC VVPEWRPMSL HSFTWSPYLN 

       550        560        570        580        590        600 
HDWDESYPER IELKRLQELA KRISTVPEAV EMQSRVTKIY NDRAEMAAGN KPFDWGAAEN 

       610        620        630        640        650        660 
LAYATLVDEG IPCRLSGEDM GRGTFFHRHA VIHNQSNGST YTPLQHVHNG QGAFKVWDSV 

       670        680        690        700        710        720 
LSEEAVLAFE YGYATAEPRT LTIWEAQFGD FANGAQVVID QFISSGEQKW GRMCGLVMLL 

       730        740        750        760        770        780 
PHGYEGQGPE HSSARLERYL QLCAEQNMQV CVPSTPAQVY HMLRRQALRG MRRPLVVMSP 

       790        800        810        820        830        840 
KSLLRHPLAV SSLEELANGA FQPAIGEIDA LDAKSVKRVV LCSGKVYYDL LDKRRKNEQT 

       850        860        870        880        890        900 
DVAIVRIEQL YPFPHKAVQD VLKQYSHVHD FVWCQEEPLN QGAWYCSQHH FREIVPFGAS 

       910        920        930 
LRYAGRPASA SPAVGYMSVH QQQQQDLVND ALNVE 

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References

[1]"Genome comparison of the epiphytic bacteria Erwinia billingiae and E. tasmaniensis with the pear pathogen E. pyrifoliae."
Kube M., Migdoll A.M., Gehring I., Heitmann K., Mayer Y., Kuhl H., Knaust F., Geider K., Reinhardt R.
BMC Genomics 11:393-393(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Ep1/96 EMBL CAX56217.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FP236842 Genomic DNA. Translation: CAX56217.1.
RefSeqYP_002649434.1. NC_012214.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING634499.EpC_24380.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAX56217; CAX56217; EpC_24380.
GeneID8538469.
KEGGepy:EpC_24380.
PATRIC20423070. VBIErwPyr67807_2420.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000259588.
KOK00164.
OMAHILRRQL.
OrthoDBEOG6V1M1F.

Enzyme and pathway databases

BioCycEPYR634499:GJIP-2508-MONOMER.

Family and domain databases

InterProIPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERPTHR23152. PTHR23152. 1 hit.
PfamPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTSM00861. Transket_pyr. 1 hit.
[Graphical view]
TIGRFAMsTIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD0FU88_ERWPE
AccessionPrimary (citable) accession number: D0FU88
Entry history
Integrated into UniProtKB/TrEMBL: November 24, 2009
Last sequence update: November 24, 2009
Last modified: November 13, 2013
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)