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Protein
Submitted name:

2-oxoglutarate dehydrogenase E1 component

Gene

sucA

Organism
Erwinia pyrifoliae (strain Ep1/96)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. oxoglutarate dehydrogenase (succinyl-transferring) activity Source: UniProtKB-EC
  2. thiamine pyrophosphate binding Source: InterPro

GO - Biological processi

  1. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseImported

Enzyme and pathway databases

BioCyciEPYR634499:GJIP-2508-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
2-oxoglutarate dehydrogenase E1 componentImported (EC:1.2.4.2Imported)
Gene namesi
Name:sucAImported
Ordered Locus Names:EpC_24380Imported
OrganismiErwinia pyrifoliae (strain Ep1/96)Imported
Taxonomic identifieri634499 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeErwinia
ProteomesiUP000007061: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi634499.EpC_24380.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000259588.
KOiK00164.
OMAiQNQGAWF.
OrthoDBiEOG6V1M1F.

Family and domain databases

Gene3Di3.40.50.970. 2 hits.
InterProiIPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERiPTHR23152. PTHR23152. 1 hit.
PfamiPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTiSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMiSSF52518. SSF52518. 2 hits.
TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.

Sequencei

Sequence statusi: Complete.

D0FU88-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MQNSAMKPWL DSSWLAGANQ SYIEQLYEDF LTDPDSVDVA WKSLFQQLPG
60 70 80 90 100
TGVRPEQIHS TTREYFRRLA KDASRYTASV SDPETNARQV KVLQMINAFR
110 120 130 140 150
FRGHQQANLD PLGLWKQESV ADLDPGYHGL SDADFEESFN VGSFASGKET
160 170 180 190 200
MKLADLYAAL KQTYCGSIGA EYMHITNTDE KRWIQQRLES VLGQVSYSVE
210 220 230 240 250
EKKGFLKQLT AAEGLERYLG AKFPGAKRFS LEGGDALVPM LNEMIRHAGK
260 270 280 290 300
SGTREVVLGM AHRGRLNVLI NVLGKKPQDL FDEFSGKHKE HLGTGDVKYH
310 320 330 340 350
MGFSSDVETE GGMVHLALAF NPSHLEIVSP VVMGSVRARL DRLDQPGSNK
360 370 380 390 400
VLPITIHGDA AVIGQGVVQE TLNMSEARGY EVGGTVRIVI NNQIGFTTSN
410 420 430 440 450
PKDARSTQYC TDIGKMVMAP IFHVNADDPE AVAFVTRLAL DFRNTFKRDV
460 470 480 490 500
FIDLVCYRRH GHNEADEPSA TQPVMYQKIK KHPTPRKIYA DKLEAAQVAS
510 520 530 540 550
LEDATEMVNL YRDALDAGEC VVPEWRPMSL HSFTWSPYLN HDWDESYPER
560 570 580 590 600
IELKRLQELA KRISTVPEAV EMQSRVTKIY NDRAEMAAGN KPFDWGAAEN
610 620 630 640 650
LAYATLVDEG IPCRLSGEDM GRGTFFHRHA VIHNQSNGST YTPLQHVHNG
660 670 680 690 700
QGAFKVWDSV LSEEAVLAFE YGYATAEPRT LTIWEAQFGD FANGAQVVID
710 720 730 740 750
QFISSGEQKW GRMCGLVMLL PHGYEGQGPE HSSARLERYL QLCAEQNMQV
760 770 780 790 800
CVPSTPAQVY HMLRRQALRG MRRPLVVMSP KSLLRHPLAV SSLEELANGA
810 820 830 840 850
FQPAIGEIDA LDAKSVKRVV LCSGKVYYDL LDKRRKNEQT DVAIVRIEQL
860 870 880 890 900
YPFPHKAVQD VLKQYSHVHD FVWCQEEPLN QGAWYCSQHH FREIVPFGAS
910 920 930
LRYAGRPASA SPAVGYMSVH QQQQQDLVND ALNVE
Length:935
Mass (Da):104,861
Last modified:November 24, 2009 - v1
Checksum:i1E78DA2B250BA83E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FP236842 Genomic DNA. Translation: CAX56217.1.
RefSeqiYP_002649434.1. NC_012214.1.

Genome annotation databases

EnsemblBacteriaiCAX56217; CAX56217; EpC_24380.
GeneIDi8538469.
KEGGiepy:EpC_24380.
PATRICi20423070. VBIErwPyr67807_2420.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FP236842 Genomic DNA. Translation: CAX56217.1.
RefSeqiYP_002649434.1. NC_012214.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi634499.EpC_24380.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAX56217; CAX56217; EpC_24380.
GeneIDi8538469.
KEGGiepy:EpC_24380.
PATRICi20423070. VBIErwPyr67807_2420.

Phylogenomic databases

HOGENOMiHOG000259588.
KOiK00164.
OMAiQNQGAWF.
OrthoDBiEOG6V1M1F.

Enzyme and pathway databases

BioCyciEPYR634499:GJIP-2508-MONOMER.

Family and domain databases

Gene3Di3.40.50.970. 2 hits.
InterProiIPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERiPTHR23152. PTHR23152. 1 hit.
PfamiPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTiSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMiSSF52518. SSF52518. 2 hits.
TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Genome comparison of the epiphytic bacteria Erwinia billingiae and E. tasmaniensis with the pear pathogen E. pyrifoliae."
    Kube M., Migdoll A.M., Gehring I., Heitmann K., Mayer Y., Kuhl H., Knaust F., Geider K., Reinhardt R.
    BMC Genomics 11:393-393(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Ep1/96Imported.

Entry informationi

Entry nameiD0FU88_ERWPE
AccessioniPrimary (citable) accession number: D0FU88
Entry historyi
Integrated into UniProtKB/TrEMBL: November 24, 2009
Last sequence update: November 24, 2009
Last modified: January 7, 2015
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.