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D0FU88

- D0FU88_ERWPE

UniProt

D0FU88 - D0FU88_ERWPE

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Protein
Submitted name: 2-oxoglutarate dehydrogenase E1 component
Gene
sucA, EpC_24380
Organism
Erwinia pyrifoliae (strain Ep1/96)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. oxoglutarate dehydrogenase (succinyl-transferring) activity Source: UniProtKB-EC
  2. thiamine pyrophosphate binding Source: InterPro

GO - Biological processi

  1. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseImported

Enzyme and pathway databases

BioCyciEPYR634499:GJIP-2508-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
2-oxoglutarate dehydrogenase E1 componentImported (EC:1.2.4.2Imported)
Gene namesi
Name:sucAImported
Ordered Locus Names:EpC_24380Imported
OrganismiErwinia pyrifoliae (strain Ep1/96)
Taxonomic identifieri634499 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeErwinia
ProteomesiUP000007061: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi634499.EpC_24380.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000259588.
KOiK00164.
OMAiGHQNANL.
OrthoDBiEOG6V1M1F.

Family and domain databases

Gene3Di3.40.50.970. 2 hits.
InterProiIPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERiPTHR23152. PTHR23152. 1 hit.
PfamiPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTiSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMiSSF52518. SSF52518. 2 hits.
TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.

Sequencei

Sequence statusi: Complete.

D0FU88-1 [UniParc]FASTAAdd to Basket

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MQNSAMKPWL DSSWLAGANQ SYIEQLYEDF LTDPDSVDVA WKSLFQQLPG    50
TGVRPEQIHS TTREYFRRLA KDASRYTASV SDPETNARQV KVLQMINAFR 100
FRGHQQANLD PLGLWKQESV ADLDPGYHGL SDADFEESFN VGSFASGKET 150
MKLADLYAAL KQTYCGSIGA EYMHITNTDE KRWIQQRLES VLGQVSYSVE 200
EKKGFLKQLT AAEGLERYLG AKFPGAKRFS LEGGDALVPM LNEMIRHAGK 250
SGTREVVLGM AHRGRLNVLI NVLGKKPQDL FDEFSGKHKE HLGTGDVKYH 300
MGFSSDVETE GGMVHLALAF NPSHLEIVSP VVMGSVRARL DRLDQPGSNK 350
VLPITIHGDA AVIGQGVVQE TLNMSEARGY EVGGTVRIVI NNQIGFTTSN 400
PKDARSTQYC TDIGKMVMAP IFHVNADDPE AVAFVTRLAL DFRNTFKRDV 450
FIDLVCYRRH GHNEADEPSA TQPVMYQKIK KHPTPRKIYA DKLEAAQVAS 500
LEDATEMVNL YRDALDAGEC VVPEWRPMSL HSFTWSPYLN HDWDESYPER 550
IELKRLQELA KRISTVPEAV EMQSRVTKIY NDRAEMAAGN KPFDWGAAEN 600
LAYATLVDEG IPCRLSGEDM GRGTFFHRHA VIHNQSNGST YTPLQHVHNG 650
QGAFKVWDSV LSEEAVLAFE YGYATAEPRT LTIWEAQFGD FANGAQVVID 700
QFISSGEQKW GRMCGLVMLL PHGYEGQGPE HSSARLERYL QLCAEQNMQV 750
CVPSTPAQVY HMLRRQALRG MRRPLVVMSP KSLLRHPLAV SSLEELANGA 800
FQPAIGEIDA LDAKSVKRVV LCSGKVYYDL LDKRRKNEQT DVAIVRIEQL 850
YPFPHKAVQD VLKQYSHVHD FVWCQEEPLN QGAWYCSQHH FREIVPFGAS 900
LRYAGRPASA SPAVGYMSVH QQQQQDLVND ALNVE 935
Length:935
Mass (Da):104,861
Last modified:November 24, 2009 - v1
Checksum:i1E78DA2B250BA83E
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FP236842 Genomic DNA. Translation: CAX56217.1.
RefSeqiYP_002649434.1. NC_012214.1.

Genome annotation databases

EnsemblBacteriaiCAX56217; CAX56217; EpC_24380.
GeneIDi8538469.
KEGGiepy:EpC_24380.
PATRICi20423070. VBIErwPyr67807_2420.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FP236842 Genomic DNA. Translation: CAX56217.1 .
RefSeqi YP_002649434.1. NC_012214.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 634499.EpC_24380.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAX56217 ; CAX56217 ; EpC_24380 .
GeneIDi 8538469.
KEGGi epy:EpC_24380.
PATRICi 20423070. VBIErwPyr67807_2420.

Phylogenomic databases

HOGENOMi HOG000259588.
KOi K00164.
OMAi GHQNANL.
OrthoDBi EOG6V1M1F.

Enzyme and pathway databases

BioCyci EPYR634499:GJIP-2508-MONOMER.

Family and domain databases

Gene3Di 3.40.50.970. 2 hits.
InterProi IPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view ]
PANTHERi PTHR23152. PTHR23152. 1 hit.
Pfami PF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view ]
PIRSFi PIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTi SM00861. Transket_pyr. 1 hit.
[Graphical view ]
SUPFAMi SSF52518. SSF52518. 2 hits.
TIGRFAMsi TIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Genome comparison of the epiphytic bacteria Erwinia billingiae and E. tasmaniensis with the pear pathogen E. pyrifoliae."
    Kube M., Migdoll A.M., Gehring I., Heitmann K., Mayer Y., Kuhl H., Knaust F., Geider K., Reinhardt R.
    BMC Genomics 11:393-393(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Ep1/96Imported.

Entry informationi

Entry nameiD0FU88_ERWPE
AccessioniPrimary (citable) accession number: D0FU88
Entry historyi
Integrated into UniProtKB/TrEMBL: November 24, 2009
Last sequence update: November 24, 2009
Last modified: June 11, 2014
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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