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D0FR08 (D0FR08_ERWPE) Unreviewed, UniProtKB/TrEMBL

Last modified December 11, 2013. Version 24. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=1.17.4.1 EMBL CAX55060.1
Gene names
Name:nrdB EMBL CAX55060.1
Ordered Locus Names:EpC_12810 EMBL CAX55060.1
OrganismErwinia pyrifoliae (strain Ep1/96) [Complete proteome] [HAMAP]
Taxonomic identifier634499 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeErwinia

Protein attributes

Sequence length376 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
D0FR08 [UniParc].

Last modified November 24, 2009. Version 1.
Checksum: 4A0150F5EAB357A4

FASTA37643,310
        10         20         30         40         50         60 
MAYTTFSQNK NDQLLEPMFF GQSVNVARFD QQKYDIFEKL IEKQLSFFWR PEEVDVSRDR 

        70         80         90        100        110        120 
IDYQALPEHE KHIFISNLKY QTLLDSIQGR SPNVALLPLI SIPELETWVE TWAFSETIHS 

       130        140        150        160        170        180 
RSYTHIIRNI VNDPALVFDD IVTNEQILSR AKDISGYYDD LIEMTSYWHL LGEGTHQVNG 

       190        200        210        220        230        240 
KTVTVNLRAL KKQLYICLMS VNALEAIRFY VSFACSFAFA ERELMEGNAK IIKLIARDEA 

       250        260        270        280        290        300 
LHLTGTQHML NLLRSGVDDP EMAEIAKECR QECYDLFVLA AEQEKEWAEY LFSGGSMIGL 

       310        320        330        340        350        360 
NKDILCQYIE YITNIRMNAV GLDLPFKTRS NPIPWINSWL VSDNVQVAPQ EVEVSSYLVG 

       370 
QIDSEVNADD LSDFQL 

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References

[1]"Genome comparison of the epiphytic bacteria Erwinia billingiae and E. tasmaniensis with the pear pathogen E. pyrifoliae."
Kube M., Migdoll A.M., Gehring I., Heitmann K., Mayer Y., Kuhl H., Knaust F., Geider K., Reinhardt R.
BMC Genomics 11:393-393(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Ep1/96 EMBL CAX55060.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FP236842 Genomic DNA. Translation: CAX55060.1.
RefSeqYP_002648304.1. NC_012214.1.

3D structure databases

ProteinModelPortalD0FR08.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING634499.EpC_12810.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAX55060; CAX55060; EpC_12810.
GeneID8538919.
KEGGepy:EpC_12810.
PATRIC20420774. VBIErwPyr67807_1289.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000278087.
KOK00526.
OMAWIETWAF.
OrthoDBEOG6J48J7.

Enzyme and pathway databases

BioCycEPYR634499:GJIP-1333-MONOMER.

Family and domain databases

Gene3D1.10.620.20. 1 hit.
InterProIPR009078. Ferritin-like_SF.
IPR012348. RNR-rel.
IPR000358. RNR_small.
[Graphical view]
PANTHERPTHR23409. PTHR23409. 1 hit.
PfamPF00268. Ribonuc_red_sm. 2 hits.
[Graphical view]
SUPFAMSSF47240. SSF47240. 1 hit.
PROSITEPS00368. RIBORED_SMALL. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD0FR08_ERWPE
AccessionPrimary (citable) accession number: D0FR08
Entry history
Integrated into UniProtKB/TrEMBL: November 24, 2009
Last sequence update: November 24, 2009
Last modified: December 11, 2013
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)