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D0FR08

- D0FR08_ERWPE

UniProt

D0FR08 - D0FR08_ERWPE

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Protein
Submitted name:

Ribonucleoside-diphosphate reductase 1 beta chain

Gene

nrdB

Organism
Erwinia pyrifoliae (strain Ep1/96)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor Source: UniProtKB-EC

GO - Biological processi

  1. deoxyribonucleoside diphosphate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseImported

Enzyme and pathway databases

BioCyciEPYR634499:GJIP-1333-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Ribonucleoside-diphosphate reductase 1 beta chainImported (EC:1.17.4.1Imported)
Gene namesi
Name:nrdBImported
Ordered Locus Names:EpC_12810Imported
OrganismiErwinia pyrifoliae (strain Ep1/96)Imported
Taxonomic identifieri634499 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeErwinia
ProteomesiUP000007061: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi634499.EpC_12810.

Structurei

3D structure databases

ProteinModelPortaliD0FR08.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000278087.
KOiK00526.
OMAiWIETWAF.
OrthoDBiEOG6J48J7.

Family and domain databases

Gene3Di1.10.620.20. 1 hit.
InterProiIPR009078. Ferritin-like_SF.
IPR012348. RNR-rel.
IPR000358. RNR_small.
[Graphical view]
PANTHERiPTHR23409. PTHR23409. 1 hit.
PfamiPF00268. Ribonuc_red_sm. 2 hits.
[Graphical view]
SUPFAMiSSF47240. SSF47240. 1 hit.
PROSITEiPS00368. RIBORED_SMALL. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D0FR08-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAYTTFSQNK NDQLLEPMFF GQSVNVARFD QQKYDIFEKL IEKQLSFFWR
60 70 80 90 100
PEEVDVSRDR IDYQALPEHE KHIFISNLKY QTLLDSIQGR SPNVALLPLI
110 120 130 140 150
SIPELETWVE TWAFSETIHS RSYTHIIRNI VNDPALVFDD IVTNEQILSR
160 170 180 190 200
AKDISGYYDD LIEMTSYWHL LGEGTHQVNG KTVTVNLRAL KKQLYICLMS
210 220 230 240 250
VNALEAIRFY VSFACSFAFA ERELMEGNAK IIKLIARDEA LHLTGTQHML
260 270 280 290 300
NLLRSGVDDP EMAEIAKECR QECYDLFVLA AEQEKEWAEY LFSGGSMIGL
310 320 330 340 350
NKDILCQYIE YITNIRMNAV GLDLPFKTRS NPIPWINSWL VSDNVQVAPQ
360 370
EVEVSSYLVG QIDSEVNADD LSDFQL
Length:376
Mass (Da):43,310
Last modified:November 24, 2009 - v1
Checksum:i4A0150F5EAB357A4
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FP236842 Genomic DNA. Translation: CAX55060.1.
RefSeqiYP_002648304.1. NC_012214.1.

Genome annotation databases

EnsemblBacteriaiCAX55060; CAX55060; EpC_12810.
GeneIDi8538919.
KEGGiepy:EpC_12810.
PATRICi20420774. VBIErwPyr67807_1289.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FP236842 Genomic DNA. Translation: CAX55060.1 .
RefSeqi YP_002648304.1. NC_012214.1.

3D structure databases

ProteinModelPortali D0FR08.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 634499.EpC_12810.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAX55060 ; CAX55060 ; EpC_12810 .
GeneIDi 8538919.
KEGGi epy:EpC_12810.
PATRICi 20420774. VBIErwPyr67807_1289.

Phylogenomic databases

HOGENOMi HOG000278087.
KOi K00526.
OMAi WIETWAF.
OrthoDBi EOG6J48J7.

Enzyme and pathway databases

BioCyci EPYR634499:GJIP-1333-MONOMER.

Family and domain databases

Gene3Di 1.10.620.20. 1 hit.
InterProi IPR009078. Ferritin-like_SF.
IPR012348. RNR-rel.
IPR000358. RNR_small.
[Graphical view ]
PANTHERi PTHR23409. PTHR23409. 1 hit.
Pfami PF00268. Ribonuc_red_sm. 2 hits.
[Graphical view ]
SUPFAMi SSF47240. SSF47240. 1 hit.
PROSITEi PS00368. RIBORED_SMALL. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Genome comparison of the epiphytic bacteria Erwinia billingiae and E. tasmaniensis with the pear pathogen E. pyrifoliae."
    Kube M., Migdoll A.M., Gehring I., Heitmann K., Mayer Y., Kuhl H., Knaust F., Geider K., Reinhardt R.
    BMC Genomics 11:393-393(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Ep1/96Imported.

Entry informationi

Entry nameiD0FR08_ERWPE
AccessioniPrimary (citable) accession number: D0FR08
Entry historyi
Integrated into UniProtKB/TrEMBL: November 24, 2009
Last sequence update: November 24, 2009
Last modified: October 1, 2014
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3