D0FR08 (D0FR08_ERWPE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Ribonucleoside-diphosphate reductase 1 beta chain EMBL CAX55060.1
EC=1.17.4.1 EMBL CAX55060.1

Gene names

Name:	nrdB EMBL CAX55060.1
Ordered Locus Names:	EpC_12810 EMBL CAX55060.1

Organism

Erwinia pyrifoliae (strain Ep1/96) [Complete proteome] [HAMAP]

Taxonomic identifier

634499 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Erwinia › Erwinia pyrifoliae

Protein attributes

Sequence length	376 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Oxidoreductase EMBL CAX55060.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	deoxyribonucleoside diphosphate metabolic process Inferred from electronic annotation. Source: InterPro
Cellular_component	ribonucleoside-diphosphate reductase complex Inferred from electronic annotation. Source: InterPro
Molecular_function	ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor Inferred from electronic annotation. Source: EC transition metal ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D0FR08 [UniParc]. Last modified November 24, 2009. Version 1. Checksum: 4A0150F5EAB357A4	FASTA	376	43,310
	10 20 30 40 50 60 MAYTTFSQNK NDQLLEPMFF GQSVNVARFD QQKYDIFEKL IEKQLSFFWR PEEVDVSRDR 70 80 90 100 110 120 IDYQALPEHE KHIFISNLKY QTLLDSIQGR SPNVALLPLI SIPELETWVE TWAFSETIHS 130 140 150 160 170 180 RSYTHIIRNI VNDPALVFDD IVTNEQILSR AKDISGYYDD LIEMTSYWHL LGEGTHQVNG 190 200 210 220 230 240 KTVTVNLRAL KKQLYICLMS VNALEAIRFY VSFACSFAFA ERELMEGNAK IIKLIARDEA 250 260 270 280 290 300 LHLTGTQHML NLLRSGVDDP EMAEIAKECR QECYDLFVLA AEQEKEWAEY LFSGGSMIGL 310 320 330 340 350 360 NKDILCQYIE YITNIRMNAV GLDLPFKTRS NPIPWINSWL VSDNVQVAPQ EVEVSSYLVG 370 QIDSEVNADD LSDFQL

References

[1]

"Genome comparison of the epiphytic bacteria Erwinia billingiae and E. tasmaniensis with the pear pathogen E. pyrifoliae." Kube M., Migdoll A.M., Gehring I., Heitmann K., Mayer Y., Kuhl H., Knaust F., Geider K., Reinhardt R. BMC Genomics 11:393-393(2010) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Ep1/96.

Cross-references

Sequence databases
EMBL GenBank DDBJ	FP236842 Genomic DNA. Translation: CAX55060.1.
RefSeq	YP_002648304.1. NC_012214.1.
3D structure databases
ProteinModelPortal	D0FR08.
ModBase	Search...
Protein-protein interaction databases
STRING	634499.EpC_12810.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CAX55060; CAX55060; EpC_12810.
GeneID	8538919.
KEGG	epy:EpC_12810.
PATRIC	20420774. VBIErwPyr67807_1289.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000278087.
KO	K00526.
OMA	LEPMFLG.
Enzyme and pathway databases
BioCyc	EPYR634499:GJIP-1333-MONOMER.
Family and domain databases
Gene3D	1.10.620.20. 1 hit.
InterPro	IPR009078. Ferritin-like_SF. IPR012348. RNR-rel. IPR000358. RNR_small. [Graphical view]
PANTHER	PTHR23409. PTHR23409. 1 hit.
Pfam	PF00268. Ribonuc_red_sm. 2 hits. [Graphical view]
SUPFAM	SSF47240. Ferritin/RR_like. 1 hit.
PROSITE	PS00368. RIBORED_SMALL. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D0FR08_ERWPE

Accession

Primary (citable) accession number: D0FR08

Entry history

Integrated into UniProtKB/TrEMBL:	November 24, 2009
Last sequence update:	November 24, 2009
Last modified:	May 1, 2013
This is version 20 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)