D0B1R5 (D0B1R5_BRUME) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
30S ribosomal protein S6 HAMAP-Rule MF_00360

Gene names

Name:	rpsF HAMAP-Rule MF_00360
ORF Names:	BAWG_0745 EMBL EEW88637.1

Organism

Brucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094)

Taxonomic identifier

224914 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Brucellaceae › Brucella › Brucella melitensis › Brucella melitensis bv. 1

Protein attributes

Sequence length	148 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Binds together with S18 to 16S ribosomal RNA By similarity. HAMAP-Rule MF_00360
Sequence similarities	Belongs to the ribosomal protein S6P family. HAMAP-Rule MF_00360

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding HAMAP-Rule MF_00360
Molecular function	Ribonucleoprotein Ribosomal protein HAMAP-Rule MF_00360 EMBL EEW88637.1
Gene Ontology (GO)
Biological_process	translation Inferred from electronic annotation. Source: HAMAP
Cellular_component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	rRNA binding Inferred from electronic annotation. Source: HAMAP structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D0B1R5 [UniParc]. Last modified November 24, 2009. Version 1. Checksum: E35740BD041F1F1F	FASTA	148	17,027
	10 20 30 40 50 60 MALYEHVLLA RQDISQQQVD ALVEQFKGVL EANGGKFGKV ENWGLRPLTY RIKKNRKAYY 70 80 90 100 110 120 TLVNIDAPAA AVAEMERQMR INEDVLSFLT VRVEEHEEGQ SAMLTRRDDR RERDGDDRPR 130 140 RREGGFDRGD RGDRGPRRPR DNEAGEGA

References

[1]

"The Genome Sequence of Brucella melitensis bv. 1 str. 16M." The Broad Institute Genome Sequencing Platform Ward D., Young S.K., Kodira C.D., Zeng Q., Koehrsen M., Alvarado L., Berlin A., Borenstein D., Chen Z., Engels R., Freedman E., Gellesch M., Goldberg J., Griggs A., Gujja S., Heiman D., Hepburn T., Howarth C. , Jen D., Larson L., Lewis B., Mehta T., Park D., Pearson M., Roberts A., Saif S., Shea T., Shenoy N., Sisk P., Stolte C., Sykes S., Walk T., White J., Yandava C., Whatmore A.M., Perrett L.L., O'Callaghan D., Nusbaum C., Galagan J., Birren B. Submitted (JUN-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: 16M EMBL EEW88637.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	GG703778 Genomic DNA. Translation: EEW88637.1.
RefSeq	NP_540397.1. NC_003317.1.
3D structure databases
ProteinModelPortal	D0B1R5.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EEW88637; EEW88637; BAWG_0745.
GeneID	1197191.
KEGG	bme:BMEI1480.
PATRIC	17796999. VBIBruMel146950_0319.
Phylogenomic databases
eggNOG	COG0360.
KO	K02990.
OMA	ITEASPM.
Family and domain databases
Gene3D	3.30.70.60. 1 hit.
HAMAP	MF_00360. Ribosomal_S6.
InterPro	IPR000529. Ribosomal_S6. IPR020814. Ribosomal_S6_plastid/chlpt. IPR014717. Transl_elong_EF1B/ribosomal_S6. [Graphical view]
Pfam	PF01250. Ribosomal_S6. 1 hit. [Graphical view]
SUPFAM	SSF54995. Ribosomal_S6. 1 hit.
TIGRFAMs	TIGR00166. S6. 1 hit.
ProtoNet	Search...

Entry information

Entry name

D0B1R5_BRUME

Accession

Primary (citable) accession number: D0B1R5

Entry history

Integrated into UniProtKB/TrEMBL:	November 24, 2009
Last sequence update:	November 24, 2009
Last modified:	April 3, 2013
This is version 20 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)