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D0AB36 (D0AB36_HUMAN) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 32. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:HLA-DRB3 EMBL CBG98936.1
OrganismHomo sapiens (Human) EMBL CBG98936.1
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length183 AA.
Sequence statusFragment.
Protein existenceEvidence at protein level

General annotation (Comments)

Sequence similarities

Contains Ig-like C1-type (immunoglobulin-like) domain. SAAS SAAS014745

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL CBG98936.1
Non-terminal residue1831 EMBL CBG98936.1

Sequences

Sequence LengthMass (Da)Tools
D0AB36 [UniParc].

Last modified November 24, 2009. Version 1.
Checksum: 1D4F1E8D454E3E2E

FASTA18321,325
        10         20         30         40         50         60 
RFLELLKSEC HFFNGTERVR FLERYFHNQE EFVRFDSDVG EYRAVTELGR PVAESWNSQK 

        70         80         90        100        110        120 
DLLEQKRGRV DNYCRHNYGV GESFTVQRRV HPQVTVYPAK TQPLQHHNLL VCSVSGFYPG 

       130        140        150        160        170        180 
SIEVRWFRNG QEEKTGVVST GLIHNGDWTF QTLVMLETVP RSGEVYTCQV EHPSVTSPLT 


VEW 

« Hide

References

[1]"New sequences found during routine HLA typing, HLA-DRB3*0303 exon 2 and 3."
Anholts J.D.H.
Submitted (OCT-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Blood EMBL CBG98936.1.
[2]"T-cell receptor (TCR) interaction with peptides that mimic nickel offers insight into nickel contact allergy."
Yin L., Crawford F., Marrack P., Kappler J.W., Dai S.
Proc. Natl. Acad. Sci. U.S.A. 109:18517-18522(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (3.30 ANGSTROMS).

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FN556017 Genomic DNA. Translation: CBG98936.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
4H1LX-ray3.30B/E1-183[»]
ModBaseSearch...
MobiDBSearch...

Proteomic databases

PRIDED0AB36.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

Gene3D2.60.40.10. 1 hit.
3.10.320.10. 1 hit.
InterProIPR007110. Ig-like_dom.
IPR013783. Ig-like_fold.
IPR003006. Ig/MHC_CS.
IPR003597. Ig_C1-set.
IPR011162. MHC_I/II-like_Ag-recog.
IPR014745. MHC_II_a/b_N.
IPR000353. MHC_II_b_N.
[Graphical view]
PfamPF07654. C1-set. 1 hit.
PF00969. MHC_II_beta. 1 hit.
[Graphical view]
ProDomPD000328. MHC_II_b_N. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SMARTSM00407. IGc1. 1 hit.
SM00921. MHC_II_beta. 1 hit.
[Graphical view]
SUPFAMSSF54452. SSF54452. 1 hit.
PROSITEPS50835. IG_LIKE. 1 hit.
PS00290. IG_MHC. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio35488897.

Entry information

Entry nameD0AB36_HUMAN
AccessionPrimary (citable) accession number: D0AB36
Entry history
Integrated into UniProtKB/TrEMBL: November 24, 2009
Last sequence update: November 24, 2009
Last modified: February 19, 2014
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.