Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

C9ZHE6 (C9ZHE6_STRSW) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 31. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Name:amlB EMBL CBG73668.1
Ordered Locus Names:SCAB_66681 EMBL CBG73668.1
OrganismStreptomyces scabies (strain 87.22) (Streptomyces scabiei) [Complete proteome] [HAMAP] EMBL CBG73668.1
Taxonomic identifier680198 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesStreptomycineaeStreptomycetaceaeStreptomyces

Protein attributes

Sequence length460 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

cation binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
C9ZHE6 [UniParc].

Last modified November 24, 2009. Version 1.
Checksum: 3F1B6F4295B7E3F3

FASTA46049,244
        10         20         30         40         50         60 
MTSRTLSGAL ALAAGASIAL TAPAGSAYAS PPGTKDVTAV LFEWNFASVA RECTSTLGPN 

        70         80         90        100        110        120 
GYGYVQVSPP AEHIQGAQWW TSYQPVSYRI AGRLGDATAF KNMIDTCHAA GVKVVVDTVV 

       130        140        150        160        170        180 
NHMSAGSGTG TGGSSYTKYD YPGLYSSFDF DDCTATISDY TNRANVQNCE LVTLADLDTG 

       190        200        210        220        230        240 
EEYVRSAIAG YMNSLLGYGV DGFRIDAAKH IPAADLANIK SRLTNSSVYW KQEAIHGSGE 

       250        260        270        280        290        300 
AVQPGEYTGN GDVQEFRYAF DLKRVFTNEN LAYLKNYGEG WGYMNSSVAG VFVDNHDTER 

       310        320        330        340        350        360 
NGSTLSYKDN ATYTLANVFM LAYPYGAPDI NSGYEFSSTD AGPPDNGRVD ACWQNGWKCQ 

       370        380        390        400        410        420 
HAWPEIMRMV AFRNATRGEA VTDWWDNGSD AIAFGRGGKG FVAINHESSG LSRTYRTSLA 

       430        440        450        460 
AGTYCNVQNN TTVTVNGSGQ FTATLGAHTA LALYAGKSSC 

« Hide

References

[1]"Streptomyces scabies 87-22 contains a coronafacic acid-like biosynthetic cluster that contributes to plant-microbe interactions."
Bignell D.R., Seipke R.F., Huguet-Tapia J.C., Chambers A.H., Parry R.J., Loria R.
Mol. Plant Microbe Interact. 23:161-175(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 87.22 EMBL CBG73668.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FN554889 Genomic DNA. Translation: CBG73668.1.
RefSeqYP_003492208.1. NC_013929.1.

3D structure databases

ProteinModelPortalC9ZHE6.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCBG73668; CBG73668; SCAB_66681.
GeneID8843458.
KEGGscb:SCAB_66681.
PATRIC35329026. VBIStrSca144334_6563.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000253313.
KOK01176.
OMAVNHMSAG.

Enzyme and pathway databases

BioCycSSCA680198:GJ76-6527-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
[Graphical view]
PRINTSPR00110. ALPHAAMYLASE.
SMARTSM00642. Aamy. 1 hit.
SM00632. Aamy_C. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC9ZHE6_STRSW
AccessionPrimary (citable) accession number: C9ZHE6
Entry history
Integrated into UniProtKB/TrEMBL: November 24, 2009
Last sequence update: November 24, 2009
Last modified: November 13, 2013
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)