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C9ZHE6

- C9ZHE6_STRSW

UniProt

C9ZHE6 - C9ZHE6_STRSW

Protein

Alpha-amylase

Gene

amlB

Organism
Streptomyces scabies (strain 87.22) (Streptomyces scabiei)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 35 (01 Oct 2014)
      Sequence version 1 (24 Nov 2009)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

    GO - Molecular functioni

    1. alpha-amylase activity Source: UniProtKB-EC
    2. cation binding Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: UniProtKB-KW

    Keywords - Molecular functioni

    GlycosidaseUniRule annotation, Hydrolase

    Keywords - Biological processi

    Carbohydrate metabolismUniRule annotation

    Enzyme and pathway databases

    BioCyciSSCA680198:GJ76-6527-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
    Gene namesi
    Name:amlBImported
    Ordered Locus Names:SCAB_66681Imported
    OrganismiStreptomyces scabies (strain 87.22) (Streptomyces scabiei)Imported
    Taxonomic identifieri680198 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesStreptomycineaeStreptomycetaceaeStreptomyces
    ProteomesiUP000001444: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliC9ZHE6.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 13 family.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000253313.
    KOiK01176.
    OMAiVAINHES.

    Family and domain databases

    Gene3Di2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProiIPR006048. A-amylase_b_C.
    IPR006046. Alpha_amylase.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    PF02806. Alpha-amylase_C. 1 hit.
    [Graphical view]
    PRINTSiPR00110. ALPHAAMYLASE.
    SMARTiSM00642. Aamy. 1 hit.
    SM00632. Aamy_C. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    C9ZHE6-1 [UniParc]FASTAAdd to Basket

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    MTSRTLSGAL ALAAGASIAL TAPAGSAYAS PPGTKDVTAV LFEWNFASVA    50
    RECTSTLGPN GYGYVQVSPP AEHIQGAQWW TSYQPVSYRI AGRLGDATAF 100
    KNMIDTCHAA GVKVVVDTVV NHMSAGSGTG TGGSSYTKYD YPGLYSSFDF 150
    DDCTATISDY TNRANVQNCE LVTLADLDTG EEYVRSAIAG YMNSLLGYGV 200
    DGFRIDAAKH IPAADLANIK SRLTNSSVYW KQEAIHGSGE AVQPGEYTGN 250
    GDVQEFRYAF DLKRVFTNEN LAYLKNYGEG WGYMNSSVAG VFVDNHDTER 300
    NGSTLSYKDN ATYTLANVFM LAYPYGAPDI NSGYEFSSTD AGPPDNGRVD 350
    ACWQNGWKCQ HAWPEIMRMV AFRNATRGEA VTDWWDNGSD AIAFGRGGKG 400
    FVAINHESSG LSRTYRTSLA AGTYCNVQNN TTVTVNGSGQ FTATLGAHTA 450
    LALYAGKSSC 460
    Length:460
    Mass (Da):49,244
    Last modified:November 24, 2009 - v1
    Checksum:i3F1B6F4295B7E3F3
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FN554889 Genomic DNA. Translation: CBG73668.1.
    RefSeqiWP_013004224.1. NC_013929.1.
    YP_003492208.1. NC_013929.1.

    Genome annotation databases

    EnsemblBacteriaiCBG73668; CBG73668; SCAB_66681.
    GeneIDi8843458.
    KEGGiscb:SCAB_66681.
    PATRICi35329026. VBIStrSca144334_6563.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FN554889 Genomic DNA. Translation: CBG73668.1 .
    RefSeqi WP_013004224.1. NC_013929.1.
    YP_003492208.1. NC_013929.1.

    3D structure databases

    ProteinModelPortali C9ZHE6.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CBG73668 ; CBG73668 ; SCAB_66681 .
    GeneIDi 8843458.
    KEGGi scb:SCAB_66681.
    PATRICi 35329026. VBIStrSca144334_6563.

    Phylogenomic databases

    HOGENOMi HOG000253313.
    KOi K01176.
    OMAi VAINHES.

    Enzyme and pathway databases

    BioCyci SSCA680198:GJ76-6527-MONOMER.

    Family and domain databases

    Gene3Di 2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProi IPR006048. A-amylase_b_C.
    IPR006046. Alpha_amylase.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    PF02806. Alpha-amylase_C. 1 hit.
    [Graphical view ]
    PRINTSi PR00110. ALPHAAMYLASE.
    SMARTi SM00642. Aamy. 1 hit.
    SM00632. Aamy_C. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Streptomyces scabies 87-22 contains a coronafacic acid-like biosynthetic cluster that contributes to plant-microbe interactions."
      Bignell D.R., Seipke R.F., Huguet-Tapia J.C., Chambers A.H., Parry R.J., Loria R.
      Mol. Plant Microbe Interact. 23:161-175(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 87.22Imported.

    Entry informationi

    Entry nameiC9ZHE6_STRSW
    AccessioniPrimary (citable) accession number: C9ZHE6
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 24, 2009
    Last sequence update: November 24, 2009
    Last modified: October 1, 2014
    This is version 35 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3