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Protein
Submitted name:

Putative arabinofuranosidase

Gene

SCAB_79241

Organism
Streptomyces scabiei (strain 87.22)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciSSCA680198:GJ76-7758-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative arabinofuranosidaseImported
Gene namesi
Ordered Locus Names:SCAB_79241Imported
OrganismiStreptomyces scabiei (strain 87.22)Imported
Taxonomic identifieri680198 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptomycetalesStreptomycetaceaeStreptomyces
Proteomesi
  • UP000001444 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 3535Sequence analysisAdd
BLAST
Chaini36 – 492457Sequence analysisPRO_5003005722Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi680198.SCAB_79241.

Structurei

3D structure databases

ProteinModelPortaliC9ZE94.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini41 – 178138Ricin B-type lectinInterPro annotationAdd
BLAST

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG4105FA9. Bacteria.
ENOG410XNWA. LUCA.
HOGENOMiHOG000025219.
OMAiNWSTANG.

Family and domain databases

InterProiIPR005193. GH62_arabinosidase.
IPR023296. Glyco_hydro_beta-prop.
IPR000772. Ricin_B_lectin.
[Graphical view]
PfamiPF03664. Glyco_hydro_62. 1 hit.
PF14200. RicinB_lectin_2. 2 hits.
[Graphical view]
SMARTiSM00458. RICIN. 1 hit.
[Graphical view]
SUPFAMiSSF50370. SSF50370. 1 hit.
SSF75005. SSF75005. 1 hit.
PROSITEiPS50231. RICIN_B_LECTIN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C9ZE94-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MWFRHLSPVS PRRLLAVLSP LLLVAAFLGA QPAAAATVDP NASYVLVNRN
60 70 80 90 100
SGKALDVHNR ATDDGARITQ WTRNDQAQQQ WQFVDSGGGY YRVKSRHSGK
110 120 130 140 150
VLDVHNLSTA NGGSIVQWAD LNGTNQQWRL ADSSDGHVRL IARHSGKALE
160 170 180 190 200
VQGAGTADNA NVVQYDDWGG TNQQWQLVKV GGDGSGPCDL PSSYRWTSTG
210 220 230 240 250
ALAQPRAEWA SLKDFTVAPY NGRQLVYATT HGAAGTGKAW GSMNFGLFTN
260 270 280 290 300
WSEMASASQN TMSSGTVAPS LFYFAPKNIW VLTYQWGATA FSYRTSTDPT
310 320 330 340 350
NPNGWSAPQP LFSGSISDSG TGPIDQTIIG DGTNMYLFFA GDNGKIYRAG
360 370 380 390 400
MPIGNFPGSF GSSYTTVMSD TVKNLFEAPQ VYKVKDRNQY LMIVEARGAD
410 420 430 440 450
EKRYFRSFTA TSLNGSWTPQ AATESNPFAG KANSGATWTN DISHGELLRT
460 470 480 490
SADQTMTVDP CNLQLLYQGR SPGSGGDYGL LPYRPGLLTL QR
Length:492
Mass (Da):53,267
Last modified:November 24, 2009 - v1
Checksum:i1279D6E407EB9900
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FN554889 Genomic DNA. Translation: CBG74885.1.
RefSeqiWP_013005335.1. NC_013929.1.

Genome annotation databases

EnsemblBacteriaiCBG74885; CBG74885; SCAB_79241.
GeneIDi24313631.
KEGGiscb:SCAB_79241.
PATRICi35331561. VBIStrSca144334_7814.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FN554889 Genomic DNA. Translation: CBG74885.1.
RefSeqiWP_013005335.1. NC_013929.1.

3D structure databases

ProteinModelPortaliC9ZE94.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi680198.SCAB_79241.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCBG74885; CBG74885; SCAB_79241.
GeneIDi24313631.
KEGGiscb:SCAB_79241.
PATRICi35331561. VBIStrSca144334_7814.

Phylogenomic databases

eggNOGiENOG4105FA9. Bacteria.
ENOG410XNWA. LUCA.
HOGENOMiHOG000025219.
OMAiNWSTANG.

Enzyme and pathway databases

BioCyciSSCA680198:GJ76-7758-MONOMER.

Family and domain databases

InterProiIPR005193. GH62_arabinosidase.
IPR023296. Glyco_hydro_beta-prop.
IPR000772. Ricin_B_lectin.
[Graphical view]
PfamiPF03664. Glyco_hydro_62. 1 hit.
PF14200. RicinB_lectin_2. 2 hits.
[Graphical view]
SMARTiSM00458. RICIN. 1 hit.
[Graphical view]
SUPFAMiSSF50370. SSF50370. 1 hit.
SSF75005. SSF75005. 1 hit.
PROSITEiPS50231. RICIN_B_LECTIN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Streptomyces scabies 87-22 contains a coronafacic acid-like biosynthetic cluster that contributes to plant-microbe interactions."
    Bignell D.R., Seipke R.F., Huguet-Tapia J.C., Chambers A.H., Parry R.J., Loria R.
    Mol. Plant Microbe Interact. 23:161-175(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 87.22Imported.

Entry informationi

Entry nameiC9ZE94_STRSW
AccessioniPrimary (citable) accession number: C9ZE94
Entry historyi
Integrated into UniProtKB/TrEMBL: November 24, 2009
Last sequence update: November 24, 2009
Last modified: May 11, 2016
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.