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C9ZBK3 (C9ZBK3_STRSW) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 33. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Ordered Locus Names:SCAB_15561 EMBL CBG68698.1
OrganismStreptomyces scabies (strain 87.22) (Streptomyces scabiei) [Complete proteome] [HAMAP] EMBL CBG68698.1
Taxonomic identifier680198 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesStreptomycineaeStreptomycetaceaeStreptomyces

Protein attributes

Sequence length985 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Catalytic activity

Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides. SAAS SAAS013812

Ontologies

Keywords
   Molecular functionGlycosidase SAAS SAAS023232
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Cellular_componentbeta-galactosidase complex

Inferred from electronic annotation. Source: InterPro

   Molecular_functionbeta-galactosidase activity

Inferred from electronic annotation. Source: InterPro

carbohydrate binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
C9ZBK3 [UniParc].

Last modified November 24, 2009. Version 1.
Checksum: 6685B9F3FA5773D3

FASTA985107,422
        10         20         30         40         50         60 
MTDALFALRP WEAPEVTSWG RLPMNAVDRR EGALSLDGGW RFQLLPSPDR EPGPGWSRAE 

        70         80         90        100        110        120 
LPGSWALQEA QDPPQYTNVR MPWPEFPPDS PSENPTGVYE REVVVPADWA GRRIVLQVGA 

       130        140        150        160        170        180 
AESVLLVHVD GRPAGLSKDS RLAAEFDLSA LVRPGERATV RLTVVKWSDA SHIEDQDQWW 

       190        200        210        220        230        240 
LGGITRPVLL YATDPLHLAD VSVRAHADGE LRVDCRVRAA AGTGTGALPA GWYVSGDLDG 

       250        260        270        280        290        300 
VELAQDREFD RLNAEDERVS DFLGEARMGT VVPGVRTWTA ETPELYGLTV RLHRADGTVA 

       310        320        330        340        350        360 
DTSRHRVGFR DVGISGRDLL VNGERVYLRG VNRHDFHPLT GRTVSREDMR ADLVTLKRFG 

       370        380        390        400        410        420 
FNAIRTSHSP GDPALYDLTD ELGFYVVDEA DIESHDHAHE IADDPRYLSA FTDRVSRMVL 

       430        440        450        460        470        480 
RDKNHPSVII WSLGNESDYG ANHDAAAGWV RRHDPTRPVQ YEGAAKLDWA ATDDASDIAC 

       490        500        510        520        530        540 
PMYAPIEDCV AHALSGEQTR PLIQCEYSHA MGNSNGTLAE TWAAIEATPG LQGGFIWEFW 

       550        560        570        580        590        600 
DHGILQRVND GRPAGRGGAG LYENGVAGPG LRWAYGGDFG ETIHDGAFIA DGVVLPDRTP 

       610        620        630        640        650        660 
KPVMYEHREI AAPVRLSVEG EGTWRVLRVH NRQHFRDLSW LAAEWEFAAA DGGTWTLPAQ 

       670        680        690        700        710        720 
LPDVPPGGSA VIDRPEPAGG AGEIWLTLRV TTAADEPWAA RGTEVCCPQV RWYPAEEGEP 

       730        740        750        760        770        780 
VVGAEEAAGR VPPPETDEAG LLLHPLLASP PVLSLWRAPT DNDVLGGMAE CWRTLGLDRA 

       790        800        810        820        830        840 
EREPVAVERE GSTVRVRSRW ATGAGFVEHE QACTALVDGR VLVEETAVLP EGLTDVARVG 

       850        860        870        880        890        900 
TVFETVAGFD QLAWYGQGPW ESYPDRAAGA PVGHHEAPVD ALFTPYLRPQ ESGGRHGVRH 

       910        920        930        940        950        960 
FTLSGGGHAL AVRLDGPRQV SVTRHRAQDL TAAAHHDELT PRPGCVVHID AAHRGLGTAS 

       970        980 
CGPDTSPAHL VPTGVHRWSW TLRAL 

« Hide

References

[1]"Streptomyces scabies 87-22 contains a coronafacic acid-like biosynthetic cluster that contributes to plant-microbe interactions."
Bignell D.R., Seipke R.F., Huguet-Tapia J.C., Chambers A.H., Parry R.J., Loria R.
Mol. Plant Microbe Interact. 23:161-175(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 87.22 EMBL CBG68698.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FN554889 Genomic DNA. Translation: CBG68698.1.
RefSeqYP_003487263.1. NC_013929.1.

3D structure databases

ProteinModelPortalC9ZBK3.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCBG68698; CBG68698; SCAB_15561.
GeneID8838564.
KEGGscb:SCAB_15561.
PATRIC35318810. VBIStrSca144334_1520.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000252444.
KOK01190.
OMAQCEYSHA.

Enzyme and pathway databases

BioCycSSCA680198:GJ76-1475-MONOMER.

Family and domain databases

Gene3D2.60.120.260. 1 hit.
2.60.40.320. 2 hits.
2.70.98.10. 1 hit.
3.20.20.80. 1 hit.
InterProIPR004199. B-gal_small/dom_5.
IPR011013. Gal_mutarotase_SF_dom.
IPR008979. Galactose-bd-like.
IPR014718. Glyco_hydro-type_carb-bd_sub.
IPR006101. Glyco_hydro_2.
IPR013812. Glyco_hydro_2/20_Ig-like.
IPR023232. Glyco_hydro_2_AS.
IPR006102. Glyco_hydro_2_Ig-like.
IPR006104. Glyco_hydro_2_N.
IPR006103. Glyco_hydro_2_TIM.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamPF02929. Bgal_small_N. 1 hit.
PF00703. Glyco_hydro_2. 1 hit.
PF02836. Glyco_hydro_2_C. 1 hit.
PF02837. Glyco_hydro_2_N. 1 hit.
[Graphical view]
PRINTSPR00132. GLHYDRLASE2.
SMARTSM01038. Bgal_small_N. 1 hit.
[Graphical view]
SUPFAMSSF49303. SSF49303. 2 hits.
SSF49785. SSF49785. 1 hit.
SSF51445. SSF51445. 1 hit.
SSF74650. SSF74650. 1 hit.
PROSITEPS00608. GLYCOSYL_HYDROL_F2_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC9ZBK3_STRSW
AccessionPrimary (citable) accession number: C9ZBK3
Entry history
Integrated into UniProtKB/TrEMBL: November 24, 2009
Last sequence update: November 24, 2009
Last modified: November 13, 2013
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)