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Protein
Submitted name:

Putative nickel superoxide dismutase

Gene

sodN

Organism
Streptomyces scabies (strain 87.22) (Streptomyces scabiei)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. nickel cation binding Source: InterPro
  2. superoxide dismutase activity Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciSSCA680198:GJ76-2892-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative nickel superoxide dismutaseImported
Gene namesi
Name:sodNImported
Ordered Locus Names:SCAB_29931Imported
OrganismiStreptomyces scabies (strain 87.22) (Streptomyces scabiei)Imported
Taxonomic identifieri680198 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesStreptomycineaeStreptomycetaceaeStreptomyces
ProteomesiUP000001444 Componenti: Chromosome

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000020289.
KOiK00518.
OMAiWTDYFKP.

Family and domain databases

Gene3Di1.20.120.400. 1 hit.
InterProiIPR014123. Superoxide_dismutase_Ni-type.
[Graphical view]
PfamiPF09055. Sod_Ni. 1 hit.
[Graphical view]
SUPFAMiSSF109770. SSF109770. 1 hit.
TIGRFAMsiTIGR02753. sodN. 1 hit.

Sequencei

Sequence statusi: Complete.

C9ZAA4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLSRLFAPKV KVSAHCDLPC GVYDPAQARI EAESVKAVQD KMAANDDPHF
60 70 80 90 100
QARATVIKEQ RAELAKHHVS VLWSDYFKPP HFEKYPELHQ LVNDALKALS
110 120 130
AAKASTDPAT GQKALDYIAQ IDKIFWETKK A
Length:131
Mass (Da):14,657
Last modified:November 24, 2009 - v1
Checksum:i3D318F6F770AAA83
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FN554889 Genomic DNA. Translation: CBG70098.1.
RefSeqiYP_003488655.1. NC_013929.1.

Genome annotation databases

EnsemblBacteriaiCBG70098; CBG70098; SCAB_29931.
KEGGiscb:SCAB_29931.
PATRICi35321666. VBIStrSca144334_2936.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FN554889 Genomic DNA. Translation: CBG70098.1.
RefSeqiYP_003488655.1. NC_013929.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCBG70098; CBG70098; SCAB_29931.
KEGGiscb:SCAB_29931.
PATRICi35321666. VBIStrSca144334_2936.

Phylogenomic databases

HOGENOMiHOG000020289.
KOiK00518.
OMAiWTDYFKP.

Enzyme and pathway databases

BioCyciSSCA680198:GJ76-2892-MONOMER.

Family and domain databases

Gene3Di1.20.120.400. 1 hit.
InterProiIPR014123. Superoxide_dismutase_Ni-type.
[Graphical view]
PfamiPF09055. Sod_Ni. 1 hit.
[Graphical view]
SUPFAMiSSF109770. SSF109770. 1 hit.
TIGRFAMsiTIGR02753. sodN. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Streptomyces scabies 87-22 contains a coronafacic acid-like biosynthetic cluster that contributes to plant-microbe interactions."
    Bignell D.R., Seipke R.F., Huguet-Tapia J.C., Chambers A.H., Parry R.J., Loria R.
    Mol. Plant Microbe Interact. 23:161-175(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 87.22Imported.

Entry informationi

Entry nameiC9ZAA4_STRSW
AccessioniPrimary (citable) accession number: C9ZAA4
Entry historyi
Integrated into UniProtKB/TrEMBL: November 24, 2009
Last sequence update: November 24, 2009
Last modified: April 1, 2015
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.