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Protein
Submitted name:

Putative 2-oxoglutarate dehydrogenase

Gene

SCAB_29781

Organism
Streptomyces scabies (strain 87.22) (Streptomyces scabiei)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciSSCA680198:GJ76-2877-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative 2-oxoglutarate dehydrogenaseImported
Gene namesi
Ordered Locus Names:SCAB_29781Imported
OrganismiStreptomyces scabies (strain 87.22) (Streptomyces scabiei)Imported
Taxonomic identifieri680198 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptomycetalesStreptomycetaceaeStreptomyces
ProteomesiUP000001444 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi680198.SCAB_29781.

Structurei

3D structure databases

ProteinModelPortaliC9ZA89.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000259587.
KOiK00164.
OMAiQNQGAWF.

Family and domain databases

Gene3Di3.30.559.10. 1 hit.
3.40.50.970. 2 hits.
InterProiIPR001078. 2-oxoacid_DH_actylTfrase.
IPR011603. 2oxoglutarate_DH_E1.
IPR023213. CAT-like_dom.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERiPTHR23152. PTHR23152. 1 hit.
PfamiPF00198. 2-oxoacid_dh. 1 hit.
PF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTiSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMiSSF52518. SSF52518. 2 hits.
TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.

Sequencei

Sequence statusi: Complete.

C9ZA89-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSPQSPSNSS ISTDADQAGK NPAAAFGPNE WLVDEIYQQY LQDPNSVDRA
60 70 80 90 100
WWDFFADYKP GAPAASAPVS TAAAAPAAPA QAAPAAPAAP APAAPKPAAV
110 120 130 140 150
PAPAVAKPAA AAPAPAKPAA AAPAKQAAPA EGPELITLRG PAAAVAKNMN
160 170 180 190 200
ASLELPTATS VRAVSVKLLF DNRIVINNHL KRARGGKISF THLIGYAMVQ
210 220 230 240 250
AIKTMPSMNW HYAEKDGKPT LVKPPHVNFG LAIDLVKPNG DRQLVVAGIK
260 270 280 290 300
KAETLNFFEF WQAYEDIVRR ARDGKLTMDD FTGVTVSLTN PGGLGTVHSV
310 320 330 340 350
PRLMPGQSVI MGVGSMDYPA EFQGTSQDTL NKLGISKVMT LTSTYDHRVI
360 370 380 390 400
QGAASGEFLR IVANYLLGEG GFYDDIFEAL RIPYEPVRWL KDIDASHDDD
410 420 430 440 450
VTKAARVFEL IHSYRVRGHV MADTDPLEYR QRKHPDLDIT EHGLTLWDLE
460 470 480 490 500
REFAVGGFSG KSLMKLRDIL GVLRDSYCRT TGVEFMHIQD PKQRRWIQDR
510 520 530 540 550
IERPHSKPER EEQLRILRRL NAAEAFETFL QTKYVGQKRF SLEGGESVIP
560 570 580 590 600
LLDAVIDSAA ESRLDEVVIG MAHRGRLNVL ANIVGKSYAQ IFREFEGNLD
610 620 630 640 650
PKSMHGSGDV KYHLGAEGTF TGLDGEQIKV SLVANPSHLE AVDPVLEGVA
660 670 680 690 700
RAKQDIINKG GTDFTVLPVA LHGDAAFAGQ GVVAETLNMS QLRGYRTGGT
710 720 730 740 750
VHIVINNQVG FTAAPESSRS SMYATDVARM IEAPIFHVNG DDPEAVVRVA
760 770 780 790 800
RLAFEFRQAF NKDVVIDLIC YRRRGHNESD NPAFTQPLMY DLIDKKRSVR
810 820 830 840 850
KLYTESLIGR GDITLEEAEQ ALQDFQGQLE KVFTEVREAI AQPAASAAAD
860 870 880 890 900
APQDGFPVSV NTAITAETVK RIAESQVNVP DHITAHPRLL PQLQRRAGMV
910 920 930 940 950
EDGTIDWGMG ETLAIGSLLL EGTPVRLAGQ DSQRGTFGQR HAVIIDRETG
960 970 980 990 1000
EEFTPLMYLS EDQARLNVYN SLLSEYAAMG FEYGYSLARP ESLVLWEAQF
1010 1020 1030 1040 1050
GDFVNGAQTV VDEFISSAEQ KWSQTSGVTL LLPHGYEGQG PDHSSARPER
1060 1070 1080 1090 1100
FLQMCAQNNM TVAMPTSPSN YFHLLRWQVH NPHHKPLVVF TPKSMLRLKA
1110 1120 1130 1140 1150
AASKAEEFTS GEFRPVIGDS SVDPNAVKKV VFCAGKVYYD LEAERQKRGI
1160 1170 1180 1190 1200
TDTAIIRIER LYPLPGAEVQ AEVNKYPNAE KYLWTQEEPA NQGAWPFIAL
1210 1220 1230 1240 1250
NLIDHLDLAV GADVPHGERL RRISRPHGSS PAVGSAKRHQ AEQEQLVREV

FDA
Length:1,253
Mass (Da):137,302
Last modified:November 24, 2009 - v1
Checksum:i8FC0016B13DB55B5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FN554889 Genomic DNA. Translation: CBG70083.1.
RefSeqiWP_013000761.1. NC_013929.1.

Genome annotation databases

EnsemblBacteriaiCBG70083; CBG70083; SCAB_29781.
GeneIDi24314394.
KEGGiscb:SCAB_29781.
PATRICi35321634. VBIStrSca144334_2920.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FN554889 Genomic DNA. Translation: CBG70083.1.
RefSeqiWP_013000761.1. NC_013929.1.

3D structure databases

ProteinModelPortaliC9ZA89.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi680198.SCAB_29781.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCBG70083; CBG70083; SCAB_29781.
GeneIDi24314394.
KEGGiscb:SCAB_29781.
PATRICi35321634. VBIStrSca144334_2920.

Phylogenomic databases

HOGENOMiHOG000259587.
KOiK00164.
OMAiQNQGAWF.

Enzyme and pathway databases

BioCyciSSCA680198:GJ76-2877-MONOMER.

Family and domain databases

Gene3Di3.30.559.10. 1 hit.
3.40.50.970. 2 hits.
InterProiIPR001078. 2-oxoacid_DH_actylTfrase.
IPR011603. 2oxoglutarate_DH_E1.
IPR023213. CAT-like_dom.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERiPTHR23152. PTHR23152. 1 hit.
PfamiPF00198. 2-oxoacid_dh. 1 hit.
PF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTiSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMiSSF52518. SSF52518. 2 hits.
TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Streptomyces scabies 87-22 contains a coronafacic acid-like biosynthetic cluster that contributes to plant-microbe interactions."
    Bignell D.R., Seipke R.F., Huguet-Tapia J.C., Chambers A.H., Parry R.J., Loria R.
    Mol. Plant Microbe Interact. 23:161-175(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 87.22Imported.

Entry informationi

Entry nameiC9ZA89_STRSW
AccessioniPrimary (citable) accession number: C9ZA89
Entry historyi
Integrated into UniProtKB/TrEMBL: November 24, 2009
Last sequence update: November 24, 2009
Last modified: July 22, 2015
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.