Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

C9ZA89 (C9ZA89_STRSW) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 30. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Ordered Locus Names:SCAB_29781 EMBL CBG70083.1
OrganismStreptomyces scabies (strain 87.22) (Streptomyces scabiei) [Complete proteome] [HAMAP] EMBL CBG70083.1
Taxonomic identifier680198 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesStreptomycineaeStreptomycetaceaeStreptomyces

Protein attributes

Sequence length1253 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
C9ZA89 [UniParc].

Last modified November 24, 2009. Version 1.
Checksum: 8FC0016B13DB55B5

FASTA1,253137,302
        10         20         30         40         50         60 
MSPQSPSNSS ISTDADQAGK NPAAAFGPNE WLVDEIYQQY LQDPNSVDRA WWDFFADYKP 

        70         80         90        100        110        120 
GAPAASAPVS TAAAAPAAPA QAAPAAPAAP APAAPKPAAV PAPAVAKPAA AAPAPAKPAA 

       130        140        150        160        170        180 
AAPAKQAAPA EGPELITLRG PAAAVAKNMN ASLELPTATS VRAVSVKLLF DNRIVINNHL 

       190        200        210        220        230        240 
KRARGGKISF THLIGYAMVQ AIKTMPSMNW HYAEKDGKPT LVKPPHVNFG LAIDLVKPNG 

       250        260        270        280        290        300 
DRQLVVAGIK KAETLNFFEF WQAYEDIVRR ARDGKLTMDD FTGVTVSLTN PGGLGTVHSV 

       310        320        330        340        350        360 
PRLMPGQSVI MGVGSMDYPA EFQGTSQDTL NKLGISKVMT LTSTYDHRVI QGAASGEFLR 

       370        380        390        400        410        420 
IVANYLLGEG GFYDDIFEAL RIPYEPVRWL KDIDASHDDD VTKAARVFEL IHSYRVRGHV 

       430        440        450        460        470        480 
MADTDPLEYR QRKHPDLDIT EHGLTLWDLE REFAVGGFSG KSLMKLRDIL GVLRDSYCRT 

       490        500        510        520        530        540 
TGVEFMHIQD PKQRRWIQDR IERPHSKPER EEQLRILRRL NAAEAFETFL QTKYVGQKRF 

       550        560        570        580        590        600 
SLEGGESVIP LLDAVIDSAA ESRLDEVVIG MAHRGRLNVL ANIVGKSYAQ IFREFEGNLD 

       610        620        630        640        650        660 
PKSMHGSGDV KYHLGAEGTF TGLDGEQIKV SLVANPSHLE AVDPVLEGVA RAKQDIINKG 

       670        680        690        700        710        720 
GTDFTVLPVA LHGDAAFAGQ GVVAETLNMS QLRGYRTGGT VHIVINNQVG FTAAPESSRS 

       730        740        750        760        770        780 
SMYATDVARM IEAPIFHVNG DDPEAVVRVA RLAFEFRQAF NKDVVIDLIC YRRRGHNESD 

       790        800        810        820        830        840 
NPAFTQPLMY DLIDKKRSVR KLYTESLIGR GDITLEEAEQ ALQDFQGQLE KVFTEVREAI 

       850        860        870        880        890        900 
AQPAASAAAD APQDGFPVSV NTAITAETVK RIAESQVNVP DHITAHPRLL PQLQRRAGMV 

       910        920        930        940        950        960 
EDGTIDWGMG ETLAIGSLLL EGTPVRLAGQ DSQRGTFGQR HAVIIDRETG EEFTPLMYLS 

       970        980        990       1000       1010       1020 
EDQARLNVYN SLLSEYAAMG FEYGYSLARP ESLVLWEAQF GDFVNGAQTV VDEFISSAEQ 

      1030       1040       1050       1060       1070       1080 
KWSQTSGVTL LLPHGYEGQG PDHSSARPER FLQMCAQNNM TVAMPTSPSN YFHLLRWQVH 

      1090       1100       1110       1120       1130       1140 
NPHHKPLVVF TPKSMLRLKA AASKAEEFTS GEFRPVIGDS SVDPNAVKKV VFCAGKVYYD 

      1150       1160       1170       1180       1190       1200 
LEAERQKRGI TDTAIIRIER LYPLPGAEVQ AEVNKYPNAE KYLWTQEEPA NQGAWPFIAL 

      1210       1220       1230       1240       1250 
NLIDHLDLAV GADVPHGERL RRISRPHGSS PAVGSAKRHQ AEQEQLVREV FDA 

« Hide

References

[1]"Streptomyces scabies 87-22 contains a coronafacic acid-like biosynthetic cluster that contributes to plant-microbe interactions."
Bignell D.R., Seipke R.F., Huguet-Tapia J.C., Chambers A.H., Parry R.J., Loria R.
Mol. Plant Microbe Interact. 23:161-175(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 87.22 EMBL CBG70083.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FN554889 Genomic DNA. Translation: CBG70083.1.
RefSeqYP_003488640.1. NC_013929.1.

3D structure databases

ProteinModelPortalC9ZA89.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCBG70083; CBG70083; SCAB_29781.
GeneID8839930.
KEGGscb:SCAB_29781.
PATRIC35321634. VBIStrSca144334_2920.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000259587.
KOK00164.
OMAHILRRQL.

Enzyme and pathway databases

BioCycSSCA680198:GJ76-2877-MONOMER.

Family and domain databases

Gene3D3.30.559.10. 1 hit.
InterProIPR001078. 2-oxoacid_DH_actylTfrase.
IPR011603. 2oxoglutarate_DH_E1.
IPR023213. CAT-like_dom.
IPR001017. DH_E1.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERPTHR23152. PTHR23152. 1 hit.
PfamPF00198. 2-oxoacid_dh. 1 hit.
PF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTSM00861. Transket_pyr. 1 hit.
[Graphical view]
TIGRFAMsTIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC9ZA89_STRSW
AccessionPrimary (citable) accession number: C9ZA89
Entry history
Integrated into UniProtKB/TrEMBL: November 24, 2009
Last sequence update: November 24, 2009
Last modified: November 13, 2013
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)