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Protein
Submitted name:

Putative DNA ligase

Gene

SCAB_13591

Organism
Streptomyces scabiei (strain 87.22)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLigaseImported

Enzyme and pathway databases

BioCyciSSCA680198:GJ76-1281-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative DNA ligaseImported
Gene namesi
Ordered Locus Names:SCAB_13591Imported
OrganismiStreptomyces scabiei (strain 87.22)Imported
Taxonomic identifieri680198 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptomycetalesStreptomycetaceaeStreptomyces
Proteomesi
  • UP000001444 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi680198.SCAB_13591.

Structurei

3D structure databases

ProteinModelPortaliC9Z888.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini105 – 227DNA_LIGASE_A3InterPro annotationAdd BLAST123

Phylogenomic databases

eggNOGiENOG4105GN4. Bacteria.
COG1793. LUCA.
HOGENOMiHOG000222508.
OMAiAGFRWHK.
OrthoDBiPOG091H08HZ.

Family and domain databases

InterProiView protein in InterPro
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
PfamiView protein in Pfam
PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiView protein in PROSITE
PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.

Sequencei

Sequence statusi: Complete.

C9Z888-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDLPVMPPVK PMLAKSVAKI PPAMHYEAKW DGFRAIVFRD GAEVEIGSRT
60 70 80 90 100
GKTLTRYFPE LVAALRERLP ERCVMDGEVV IVRGGHLDFD ALTERIHPAD
110 120 130 140 150
SRVRMLAETT PASFVAFDML ALNDESLLDV PLTDRRALLE LALSEVTAPV
160 170 180 190 200
HVAPATRDRE LAERWFEQYE GAGLDGVIAK PLDLRYRQDE RAMFKIKHER
210 220 230 240 250
TADVVIAGYR FHKSGPVVGS LLLGLYDAGG ALQHIGVCAA FTMKRRAELV
260 270 280 290 300
AELEPWRLQD VGEHPWAAWA EEAAHDTARL PGAPSRWSAK KDFSWVPLRP
310 320 330 340 350
ERVAEVAYDH MENGVRFRHT ARFRRWRPDR TAESCTYGQL EEPVTYDLAE

ILGPDAGP
Length:358
Mass (Da):40,226
Last modified:November 24, 2009 - v1
Checksum:iD0F55FC1A2A58DF2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FN554889 Genomic DNA. Translation: CBG68516.1.
RefSeqiWP_012999246.1. NC_013929.1.

Genome annotation databases

EnsemblBacteriaiCBG68516; CBG68516; SCAB_13591.
GeneIDi24312407.
KEGGiscb:SCAB_13591.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiC9Z888_STRSW
AccessioniPrimary (citable) accession number: C9Z888
Entry historyiIntegrated into UniProtKB/TrEMBL: November 24, 2009
Last sequence update: November 24, 2009
Last modified: June 7, 2017
This is version 47 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported