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C9Z888

- C9Z888_STRSW

UniProt

C9Z888 - C9Z888_STRSW

Protein
Submitted name:

Putative DNA ligase

Gene

SCAB_13591

Organism
Streptomyces scabies (strain 87.22) (Streptomyces scabiei)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 31 (01 Oct 2014)
      Sequence version 1 (24 Nov 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciSSCA680198:GJ76-1293-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative DNA ligaseImported
    Gene namesi
    Ordered Locus Names:SCAB_13591Imported
    OrganismiStreptomyces scabies (strain 87.22) (Streptomyces scabiei)Imported
    Taxonomic identifieri680198 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesStreptomycineaeStreptomycetaceaeStreptomyces
    ProteomesiUP000001444: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliC9Z888.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000222508.
    KOiK01971.
    OMAiHERTADC.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    C9Z888-1 [UniParc]FASTAAdd to Basket

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    MDLPVMPPVK PMLAKSVAKI PPAMHYEAKW DGFRAIVFRD GAEVEIGSRT    50
    GKTLTRYFPE LVAALRERLP ERCVMDGEVV IVRGGHLDFD ALTERIHPAD 100
    SRVRMLAETT PASFVAFDML ALNDESLLDV PLTDRRALLE LALSEVTAPV 150
    HVAPATRDRE LAERWFEQYE GAGLDGVIAK PLDLRYRQDE RAMFKIKHER 200
    TADVVIAGYR FHKSGPVVGS LLLGLYDAGG ALQHIGVCAA FTMKRRAELV 250
    AELEPWRLQD VGEHPWAAWA EEAAHDTARL PGAPSRWSAK KDFSWVPLRP 300
    ERVAEVAYDH MENGVRFRHT ARFRRWRPDR TAESCTYGQL EEPVTYDLAE 350
    ILGPDAGP 358
    Length:358
    Mass (Da):40,226
    Last modified:November 24, 2009 - v1
    Checksum:iD0F55FC1A2A58DF2
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FN554889 Genomic DNA. Translation: CBG68516.1.
    RefSeqiYP_003487086.1. NC_013929.1.

    Genome annotation databases

    EnsemblBacteriaiCBG68516; CBG68516; SCAB_13591.
    GeneIDi8838369.
    KEGGiscb:SCAB_13591.
    PATRICi35318448. VBIStrSca144334_1339.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FN554889 Genomic DNA. Translation: CBG68516.1 .
    RefSeqi YP_003487086.1. NC_013929.1.

    3D structure databases

    ProteinModelPortali C9Z888.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CBG68516 ; CBG68516 ; SCAB_13591 .
    GeneIDi 8838369.
    KEGGi scb:SCAB_13591.
    PATRICi 35318448. VBIStrSca144334_1339.

    Phylogenomic databases

    HOGENOMi HOG000222508.
    KOi K01971.
    OMAi HERTADC.

    Enzyme and pathway databases

    BioCyci SSCA680198:GJ76-1293-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Streptomyces scabies 87-22 contains a coronafacic acid-like biosynthetic cluster that contributes to plant-microbe interactions."
      Bignell D.R., Seipke R.F., Huguet-Tapia J.C., Chambers A.H., Parry R.J., Loria R.
      Mol. Plant Microbe Interact. 23:161-175(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 87.22Imported.

    Entry informationi

    Entry nameiC9Z888_STRSW
    AccessioniPrimary (citable) accession number: C9Z888
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 24, 2009
    Last sequence update: November 24, 2009
    Last modified: October 1, 2014
    This is version 31 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3