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C9Z0V4 (C9Z0V4_STRSW) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 31. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:SCAB_39881 EMBL CBG71067.1
OrganismStreptomyces scabies (strain 87.22) (Streptomyces scabiei) [Complete proteome] [HAMAP] EMBL CBG71067.1
Taxonomic identifier680198 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesStreptomycineaeStreptomycetaceaeStreptomyces

Protein attributes

Sequence length479 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Sequences

Sequence LengthMass (Da)Tools
C9Z0V4 [UniParc].

Last modified November 24, 2009. Version 1.
Checksum: 1D671A808F21953F

FASTA47953,024
        10         20         30         40         50         60 
MPLHRWDSDD ARDGGNGRKD GHRLAVNPFY GQANPAGGMT EAPPKHRLPD APLPPSTAYQ 

        70         80         90        100        110        120 
LVHDELMLDG NSRLNLATFV TTWMEPEAGV LMGECRDKNM IDKDEYPRTA ELERRCVSML 

       130        140        150        160        170        180 
ADLWNAPDPA AAVGCSTTGS SEACMLAGMA LKRRWAKRNA DRYPSADARP NLVMGVNVQV 

       190        200        210        220        230        240 
CWEKFCNFWE VEARQVPMEG DRFHLDPAAA AALCDENTIG VVGVLGSTFD GSYEPIAELC 

       250        260        270        280        290        300 
AVLDDLQERT GLNVPVHVDG ASGAMVAPFL DEELVWDFRL PRVASINTSG HKYGLVYPGV 

       310        320        330        340        350        360 
GWALWRSAEE LPEELVFRVN YLGGDMPTFA LNFSRPGAQV VAQYYTFLRL GREGFRAVQQ 

       370        380        390        400        410        420 
STRDVATLLA QQVGGFGDFR LLTRGDELPV FAFTTNEDVT AYDVFDVARR MRERGWLVPA 

       430        440        450        460        470 
YTFPENREDL SVLRVVCRNG FTSDLAGLFM EDLGSLLPEL RRQRGPLTRD AGAATGFHH 

« Hide

References

[1]"Streptomyces scabies 87-22 contains a coronafacic acid-like biosynthetic cluster that contributes to plant-microbe interactions."
Bignell D.R., Seipke R.F., Huguet-Tapia J.C., Chambers A.H., Parry R.J., Loria R.
Mol. Plant Microbe Interact. 23:161-175(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 87.22 EMBL CBG71067.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FN554889 Genomic DNA. Translation: CBG71067.1.
RefSeqYP_003489618.1. NC_013929.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCBG71067; CBG71067; SCAB_39881.
GeneID8840822.
KEGGscb:SCAB_39881.
PATRIC35323628. VBIStrSca144334_3909.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000070228.
KOK01580.
OMAAQYYTFL.

Enzyme and pathway databases

BioCycSSCA680198:GJ76-3870-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC9Z0V4_STRSW
AccessionPrimary (citable) accession number: C9Z0V4
Entry history
Integrated into UniProtKB/TrEMBL: November 24, 2009
Last sequence update: November 24, 2009
Last modified: May 14, 2014
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)