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C9Z0I0 (C9Z0I0_STRSW) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 33. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length223 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + thymidine = ADP + thymidine 5'-phosphate. HAMAP-Rule MF_00124 SAAS SAAS020634

Subunit structure

Homotetramer By similarity. HAMAP-Rule MF_00124

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00124.

Sequence similarities

Belongs to the thymidine kinase family. HAMAP-Rule MF_00124

Ontologies

Keywords
   Biological processDNA synthesis HAMAP-Rule MF_00124 SAAS SAAS020634
   Cellular componentCytoplasm HAMAP-Rule MF_00124
   LigandATP-binding HAMAP-Rule MF_00124 SAAS SAAS020634
Nucleotide-binding
   Molecular functionKinase HAMAP-Rule MF_00124 SAAS SAAS020634 EMBL CBG69533.1
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA replication

Inferred from electronic annotation. Source: UniProtKB-KW

   Cellular_componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular_functionATP binding

Inferred from electronic annotation. Source: UniProtKB-HAMAP

thymidine kinase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding17 – 248ATP By similarity HAMAP-Rule MF_00124
Nucleotide binding94 – 974ATP By similarity HAMAP-Rule MF_00124

Sites

Active site951Proton acceptor By similarity HAMAP-Rule MF_00124

Sequences

Sequence LengthMass (Da)Tools
C9Z0I0 [UniParc].

Last modified November 24, 2009. Version 1.
Checksum: 1BCE0D6D2FA23886

FASTA22324,428
        10         20         30         40         50         60 
MPKGAQLTMP ELVFFSGTMD CGKSTLALQI EHNRSARGLQ GMIFTRDDRA GEGKLSSRLG 

        70         80         90        100        110        120 
LVTDAVEVED GQDLYAYLVD HLSQGRRADY VIADEAQFLA PEQIDQLARV VDDLSLDVYA 

       130        140        150        160        170        180 
FGITTDFRSK LFPGSQRLVE LADRVEVLQV EALCWCGARA THNARTIGGQ MVVEGAQVVV 

       190        200        210        220 
GDVNQPDDIG YEVLCRRHHR RRMTAASAHA SALAPDVLPV ETV 

« Hide

References

[1]"Streptomyces scabies 87-22 contains a coronafacic acid-like biosynthetic cluster that contributes to plant-microbe interactions."
Bignell D.R., Seipke R.F., Huguet-Tapia J.C., Chambers A.H., Parry R.J., Loria R.
Mol. Plant Microbe Interact. 23:161-175(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 87.22 EMBL CBG69533.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FN554889 Genomic DNA. Translation: CBG69533.1.
RefSeqYP_003488092.1. NC_013929.1.

3D structure databases

ProteinModelPortalC9Z0I0.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCBG69533; CBG69533; SCAB_24181.
GeneID8839429.
KEGGscb:SCAB_24181.
PATRIC35320498. VBIStrSca144334_2362.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000076391.
KOK00857.
OMAELKTVCH.

Enzyme and pathway databases

BioCycSSCA680198:GJ76-2315-MONOMER.

Family and domain databases

Gene3D3.40.50.300. 1 hit.
HAMAPMF_00124. Thymidine_kinase.
InterProIPR027417. P-loop_NTPase.
IPR001267. Thymidine_kinase.
IPR020634. Thymidine_kinase_subgr.
[Graphical view]
PfamPF00265. TK. 1 hit.
[Graphical view]
PIRSFPIRSF035805. TK_cell. 1 hit.
SUPFAMSSF52540. SSF52540. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC9Z0I0_STRSW
AccessionPrimary (citable) accession number: C9Z0I0
Entry history
Integrated into UniProtKB/TrEMBL: November 24, 2009
Last sequence update: November 24, 2009
Last modified: June 11, 2014
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)