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C9YY64 (C9YY64_STRSW) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 28. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Triosephosphate isomerase HAMAP-Rule MF_00147
Short name=TIM HAMAP-Rule MF_00147
EC=5.3.1.1 HAMAP-Rule MF_00147
Alternative name(s):
Triose-phosphate isomerase HAMAP-Rule MF_00147
Gene names
Name:tpiA HAMAP-Rule MF_00147 EMBL CBG73966.1
Ordered Locus Names:SCAB_69721
OrganismStreptomyces scabies (strain 87.22) (Streptomyces scabiei) [Complete proteome] [HAMAP]
Taxonomic identifier680198 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Streptomycineae › Streptomycetaceae › Streptomyces ›

Protein attributes

Sequence length297 AA.
Sequence statusComplete.
Protein existenceInferred from homology

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site1011Electrophile By similarity HAMAP-Rule MF_00147
Active site1731Proton acceptor By similarity HAMAP-Rule MF_00147
Binding site111Substrate By similarity HAMAP-Rule MF_00147
Binding site131Substrate By similarity HAMAP-Rule MF_00147

Sequences

Sequence LengthMass (Da)Tools
C9YY64 [UniParc].

Last modified November 24, 2009. Version 1.
Checksum: 6DB11623CA43B2A1

FASTA29731,810
        10         20         30         40         50         60 
MSTRTPLMAG NWKMNLNHLE AIAHVQKLAF ALADKDYEAC EVAVLPPFTD LRSVQTLVDG 

        70         80         90        100        110        120 
DKLKIKYGAQ DLSAHDSGAY TGEISGPMLA KLKCTFVAIG HSERRQYHDE TDEIVNAKVK 

       130        140        150        160        170        180 
SAYKHGLTPI LCVGEELEVR EAGNHVSHTL AQVEGGLKDV SAEHAETVVV AYEPVWAIGT 

       190        200        210        220        230        240 
GKVCGAEDAQ EVCAAIRAKL AELYGQELAD KVRIQYGGSV KAGNVAEIMA QADIDGALVG 

       250        260        270        280        290 
ELYGQELADK VRIQYGGSVK AGNVAEIMAQ ADIDGALVGG ASLDADEFVK IVRFRDQ

« Hide

References

[1]"The first genome sequence of a pathogenic streptomycete, Streptomyces scabies."
Yaxley A., Bentley S.D., Loria R.
Submitted (SEP-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 87.22.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		FN554889 Genomic DNA. Translation: CBG73966.1.
RefSeqYP_003492505.1. NC_013929.1.

3D structure databases

ProteinModelPortalC9YY64.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCBG73966; CBG73966; SCAB_69721.
GeneID8846424.
KEGGscb:SCAB_69721.
PATRIC35329638. VBIStrSca144334_6868.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000226414.
KOK01803.
OMASECRTYL.

Enzyme and pathway databases

BioCycSSCA680198:GJ76-6826-MONOMER.
UniPathwayUPA00109; UER00189.
UPA00138.

Family and domain databases

Gene3D3.20.20.70. 2 hits.
HAMAPMF_00147_B. TIM_B.
InterProIPR013785. Aldolase_TIM.
IPR022896. TrioseP_Isoase_bac/euk.
IPR000652. Triosephosphate_isomerase.
IPR020861. Triosephosphate_isomerase_AS.
[Graphical view]
PANTHERPTHR21139. PTHR21139. 1 hit.
PfamPF00121. TIM. 2 hits.
[Graphical view]
SUPFAMSSF51351. Triophos_ismrse. 2 hits.
TIGRFAMsTIGR00419. tim. 1 hit.
PROSITEPS00171. TIM_1. 1 hit.
PS51440. TIM_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC9YY64_STRSW
AccessionPrimary (citable) accession number: C9YY64
Entry history
Integrated into UniProtKB/TrEMBL: November 24, 2009
Last sequence update: November 24, 2009
Last modified: May 29, 2013
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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