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C9YY08

- C9YY08_STRSW

UniProt

C9YY08 - C9YY08_STRSW

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Protein

Phosphoenolpyruvate carboxylase

Gene

ppc

Organism
Streptomyces scabies (strain 87.22) (Streptomyces scabiei)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.UniRule annotationSAAS annotation

Catalytic activityi

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.UniRule annotationSAAS annotation

Cofactori

Note: Magnesium.UniRule annotationSAAS annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei136 – 1361UniRule annotation
Active sitei568 – 5681UniRule annotation

GO - Molecular functioni

  1. magnesium ion binding Source: UniProtKB-HAMAP
  2. phosphoenolpyruvate carboxylase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. carbon fixation Source: UniProtKB-HAMAP
  2. oxaloacetate metabolic process Source: UniProtKB-HAMAP
  3. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotationSAAS annotation

Keywords - Biological processi

Carbon dioxide fixationUniRule annotationSAAS annotation

Keywords - Ligandi

MagnesiumUniRule annotationSAAS annotation, PyruvateImported

Enzyme and pathway databases

BioCyciSSCA680198:GJ76-5283-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Phosphoenolpyruvate carboxylaseUniRule annotation (EC:4.1.1.31UniRule annotation)
Short name:
PEPCUniRule annotation
Short name:
PEPCaseUniRule annotation
Gene namesi
Name:ppcUniRule annotationImported
Ordered Locus Names:SCAB_54111Imported
OrganismiStreptomyces scabies (strain 87.22) (Streptomyces scabiei)Imported
Taxonomic identifieri680198 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesStreptomycineaeStreptomycetaceaeStreptomyces
ProteomesiUP000001444: Chromosome

Interactioni

Subunit structurei

Homotetramer.UniRule annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the PEPCase type 1 family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000238647.
KOiK01595.
OMAiISCQHYR.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C9YY08-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSSADDQTTT VSSELRADIR RLGDLLGETL VRQEGPDLLE LVERVRSLTR
60 70 80 90 100
EDGEAAADLL RGTELETAAK LVRAFSTYFH LANVTEQVHR GRELRARRAA
110 120 130 140 150
EGGLLARTAD RLKDADPEHV RETVGNLNVR PVFTAHPTEA ARRSVLNKLR
160 170 180 190 200
RIAALLETPV IDSDRRRHDT RLAENIDLVW QTDELRVVRP EPADEARNAI
210 220 230 240 250
YYLDELHAGA VGDVLEDLTA ELERVGVTIP DATRPLTFGT WIGGDRDGNP
260 270 280 290 300
NVTPQVTWDV LILQHEHGIN DALELIDELR GFLSNSIRYT GATEDLLTSL
310 320 330 340 350
RADLEALPEI SPRYKRLNAE EPYRLKATCI RQKLENTKQR LAKGIPHEDG
360 370 380 390 400
RDYLGTGELL KDLTLIQTSL REHRGGLFAD GRMNRTIRTL AAFGLQLATM
410 420 430 440 450
DVREHADAHH HALGQLFDRL GEESWRYEDM PREYRHKLLA RELRSRRPLG
460 470 480 490 500
PTPAPLDAAG AKTLGVFETV KKALAVFGPE VIESYIISMC QGADDVFAAT
510 520 530 540 550
VLAREAGLVD LHAGWARIGI VPLLETTDEL KSADTILEEM LADPSYRRLV
560 570 580 590 600
ALRGDVQEVM LGYSDSSKFG GITTSQWEIH RAQRRLRDVA HRYGVRLRLF
610 620 630 640 650
HGRGGTVGRG GGPSHDAILA QPWGTLEGEI KVTEQGEVIS DKYLVPSLAR
660 670 680 690 700
ENLELTVAAT LQASALHTSP RQSVEALARW DAAMDLVSDA AHAAYRRLVE
710 720 730 740 750
DPDLPTYFLA STPVDQLADL HLGSRPSRRP GSGVSLDGLR AIPWVFGWTQ
760 770 780 790 800
SRQIVPGWFG VGSGLKALRE AGLDTVLDEM HEQWHFFRNF LSNVEMTLAK
810 820 830 840 850
TDLRIAQHYV DTLVPDELKH VFDTIRTEHE LTVREVLRVT GEEKLLDANP
860 870 880 890 900
VLQQTFSIRD AYLDPISYLQ VALLKRQRDA AAAGEEADPL LARALLLTVN
910
GVAAGLRNTG
Length:910
Mass (Da):101,244
Last modified:November 24, 2009 - v1
Checksum:i3818008EF25E2397
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FN554889 Genomic DNA. Translation: CBG72447.1.
RefSeqiWP_013003024.1. NC_013929.1.
YP_003490988.1. NC_013929.1.

Genome annotation databases

EnsemblBacteriaiCBG72447; CBG72447; SCAB_54111.
GeneIDi8842236.
KEGGiscb:SCAB_54111.
PATRICi35326500. VBIStrSca144334_5320.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FN554889 Genomic DNA. Translation: CBG72447.1 .
RefSeqi WP_013003024.1. NC_013929.1.
YP_003490988.1. NC_013929.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CBG72447 ; CBG72447 ; SCAB_54111 .
GeneIDi 8842236.
KEGGi scb:SCAB_54111.
PATRICi 35326500. VBIStrSca144334_5320.

Phylogenomic databases

HOGENOMi HOG000238647.
KOi K01595.
OMAi ISCQHYR.

Enzyme and pathway databases

BioCyci SSCA680198:GJ76-5283-MONOMER.

Family and domain databases

HAMAPi MF_00595. PEPcase_type1.
InterProi IPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view ]
Pfami PF00311. PEPcase. 1 hit.
[Graphical view ]
PRINTSi PR00150. PEPCARBXLASE.
SUPFAMi SSF51621. SSF51621. 1 hit.
PROSITEi PS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Streptomyces scabies 87-22 contains a coronafacic acid-like biosynthetic cluster that contributes to plant-microbe interactions."
    Bignell D.R., Seipke R.F., Huguet-Tapia J.C., Chambers A.H., Parry R.J., Loria R.
    Mol. Plant Microbe Interact. 23:161-175(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 87.22Imported.

Entry informationi

Entry nameiC9YY08_STRSW
AccessioniPrimary (citable) accession number: C9YY08
Entry historyi
Integrated into UniProtKB/TrEMBL: November 24, 2009
Last sequence update: November 24, 2009
Last modified: November 26, 2014
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3