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C9YSZ3 (C9YSZ3_STRSW) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 14. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:SCAB_18831
OrganismStreptomyces scabies (strain 87.22) (Streptomyces scabiei) [Complete proteome] [HAMAP]
Taxonomic identifier680198 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesStreptomycineaeStreptomycetaceaeStreptomyces

Protein attributes

Sequence length438 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processcarbohydrate utilization

Inferred from electronic annotation. Source: InterPro

   Molecular functionlevansucrase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
C9YSZ3 [UniParc].

Last modified November 24, 2009. Version 1.
Checksum: B909ABFFAA2C9651

FASTA43848,418
        10         20         30         40         50         60 
MLIRLATGLM ALAMTGGVAA PASADEPASS RTGTRQYSAD DDYFAVWSRA DALKLRQDRT 

        70         80         90        100        110        120 
NTAPRVSPDF PVMTDKVWVW DTWPLTKLTT KTATYKGWHV IFSLTAPRSV PFGDRHWYAK 

       130        140        150        160        170        180 
IGYFYSRDAK SWKYGGDLFK PGTSFGSREW AGSTALVGDK VYSFYTASGR DNGGVDPSDA 

       190        200        210        220        230        240 
LQRLAQATGK IHADRKRVWF SGFQDHRIIA EADGKLYQTL QQSQAGPIIY AFRDPFVFRD 

       250        260        270        280        290        300 
PRDRKIHLLF EGNTGGVAGT YRCTERDIGD VPAGHEVPED AKYYTGNIGL ATADSGSMDN 

       310        320        330        340        350        360 
WRLQPPLLSA NCVNQQTERP HLVIRNGKYY LFTISHKFTF APGLSGWDGL YGFVGPSLRS 

       370        380        390        400        410        420 
DYRPLNGSAL VLGNPEAAPT QQYSHYVMPN GLVESFIDTV PTADGGTRFG GTLARTLLVS 

       430 
LKGDRTKLVK QLDYGFIP 

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References

[1]"Streptomyces scabies 87-22 contains a coronafacic acid-like biosynthetic cluster that contributes to plant-microbe interactions."
Bignell D.R., Seipke R.F., Huguet-Tapia J.C., Chambers A.H., Parry R.J., Loria R.
Mol. Plant Microbe Interact. 23:161-175(2010) [PubMed: 20064060] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 87.22 EMBL CBG69007.1.
[2]Bentley S.D.
Submitted (SEP-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 87.22 EMBL CBG69007.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FN554889 Genomic DNA. Translation: CBG69007.1.
RefSeqYP_003487572.1. NC_013929.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID8838884.
GenomeReviewsGene locus SCAB_18831 in contig FN554889_GR.
KEGGscb:SCAB_18831.
PATRIC35319460. VBIStrSca144334_1844.

Organism-specific databases

CMRSearch...

Phylogenomic databases

OMAWTRADAK.

Family and domain databases

InterProIPR023296. Glyco_hydro_43_beta-prop.
IPR003469. Glyco_hydro_68.
[Graphical view]
Gene3DG3DSA:2.115.10.20. Glyco_hydro_43_beta-prop. 1 hit.
KOK00692.
PfamPF02435. Glyco_hydro_68. 1 hit.
[Graphical view]
SUPFAMSSF75005. Glyco_hydro_43_beta-prop. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC9YSZ3_STRSW
AccessionPrimary (citable) accession number: C9YSZ3
Entry history
Integrated into UniProtKB/TrEMBL: November 24, 2009
Last sequence update: November 24, 2009
Last modified: December 14, 2011
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)