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C9YNE4 (C9YNE4_CLODR) Unreviewed, UniProtKB/TrEMBL

Last modified December 11, 2013. Version 25. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:CDR20291_2103 EMBL CBE05164.1
OrganismClostridium difficile (strain R20291) [Complete proteome] [HAMAP] EMBL CBE05164.1
Taxonomic identifier645463 [NCBI]
Taxonomic lineageBacteriaFirmicutesClostridiaClostridialesPeptostreptococcaceae

Protein attributes

Sequence length179 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
C9YNE4 [UniParc].

Last modified November 24, 2009. Version 1.
Checksum: E5A38104248FF5AE

FASTA17919,278
        10         20         30         40         50         60 
MEKELVFAGF GGQGVLTLGL IVAESALELG KQVTWMPAYG PTMRGGKAYS VVKFSDESIG 

        70         80         90        100        110        120 
GPDMEEIDVL VAMNKPSLDY INLVKEGGTV VINTSAIDEN VTLREDISVV KINCQELAQK 

       130        140        150        160        170 
VNNPKAANIV VLGALIAKTG LLEKELALKT MCDFFEEKGK GKFNVQNEAA FMEGYNNAI 

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References

[1]"Comparative genome and phenotypic analysis of Clostridium difficile 027 strains provides insight into the evolution of a hypervirulent bacterium."
Stabler R.A., He M., Dawson L., Martin M., Valiente E., Corton C., Lawley T.D., Sebaihia M., Quail M.A., Rose G., Gerding D.N., Gibert M., Popoff M.R., Parkhill J., Dougan G., Wren B.W.
Genome Biol. 10:R102.1-R102.15(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: R20291 EMBL CBE05164.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FN545816 Genomic DNA. Translation: CBE05164.1.
RefSeqYP_003218590.1. NC_013316.1.

3D structure databases

ProteinModelPortalC9YNE4.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING645463.CDR20291_2103.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCBE05164; CBE05164; CDR20291_2103.
GeneID8468398.
KEGGcdl:CDR20291_2103.
PATRIC19458207. VBICloDif78408_2251.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1014.
HOGENOMHOG000228814.
KOK00177.
OMAVEVIMAG.
OrthoDBEOG6716N3.

Enzyme and pathway databases

BioCycCDIF645463:GJP4-2181-MONOMER.

Family and domain databases

Gene3D3.40.920.10. 1 hit.
InterProIPR019752. Pyrv/ketoisovalerate_OxRed_cat.
IPR002869. Pyrv_flavodox_OxRed_cen.
[Graphical view]
PfamPF01558. POR. 1 hit.
[Graphical view]
SUPFAMSSF53323. SSF53323. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC9YNE4_CLODR
AccessionPrimary (citable) accession number: C9YNE4
Entry history
Integrated into UniProtKB/TrEMBL: November 24, 2009
Last sequence update: November 24, 2009
Last modified: December 11, 2013
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)