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C9YJU8

- C9YJU8_PEPDR

UniProt

C9YJU8 - C9YJU8_PEPDR

Protein
Submitted name:

Putative D-3-phosphoglycerate dehydrogenase

Gene

serA

Organism
Peptoclostridium difficile (strain R20291) (Clostridium difficile)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 38 (01 Oct 2014)
      Sequence version 1 (24 Nov 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. NAD binding Source: InterPro
    2. oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor Source: InterPro

    Enzyme and pathway databases

    BioCyciCDIF645463:GJP4-923-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative D-3-phosphoglycerate dehydrogenaseImported
    Gene namesi
    Name:serAImported
    Ordered Locus Names:CDR20291_0848Imported
    OrganismiPeptoclostridium difficile (strain R20291) (Clostridium difficile)Imported
    Taxonomic identifieri645463 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesPeptostreptococcaceaePeptoclostridium
    ProteomesiUP000002070: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi645463.CDR20291_0848.

    Structurei

    3D structure databases

    ProteinModelPortaliC9YJU8.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0111.
    HOGENOMiHOG000136700.
    KOiK00058.
    OMAiFGRIGYQ.
    OrthoDBiEOG6VXFC3.

    Family and domain databases

    Gene3Di3.40.50.720. 2 hits.
    InterProiIPR006139. D-isomer_2_OHA_DH_cat_dom.
    IPR006140. D-isomer_DH_NAD-bd.
    IPR016040. NAD(P)-bd_dom.
    [Graphical view]
    PfamiPF00389. 2-Hacid_dh. 1 hit.
    PF02826. 2-Hacid_dh_C. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    C9YJU8-1 [UniParc]FASTAAdd to Basket

    « Hide

    MYNILVTDGI EKEAARKLRE LDFNVIEQFY EKDVLGDKLK DVDVLVVRSA    50
    TKVTKDVIDK ALEGKKLKLI VRGGVGLDNI DVKYAQANGI KVMNTPNASS 100
    ISVAELTIGQ LFVLARFINT ANVTMRDGKW EKKKYKGTEI NGKTLGLIGF 150
    GRIAKEVAKR AELLGMNVIY TDIMGEAQGF NNYKFCDMEE VLENADFLSL 200
    HIPFDKNKGA VITEKEINKM KKGAYLINCA RGGLVDEKDL LKALDEGKLS 250
    AAAIDVYEQE PTLNLDLVNH PRVSPTPHIG ASTVEAQERI GDEIVNVIQD 300
    FFLDFNNLIG VAL 313
    Length:313
    Mass (Da):34,666
    Last modified:November 24, 2009 - v1
    Checksum:i49503EA420A04067
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FN545816 Genomic DNA. Translation: CBE02943.1.
    RefSeqiYP_003217349.1. NC_013316.1.

    Genome annotation databases

    EnsemblBacteriaiCBE02943; CBE02943; CDR20291_0848.
    GeneIDi8467458.
    KEGGicdl:CDR20291_0848.
    PATRICi19455510. VBICloDif78408_0910.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FN545816 Genomic DNA. Translation: CBE02943.1 .
    RefSeqi YP_003217349.1. NC_013316.1.

    3D structure databases

    ProteinModelPortali C9YJU8.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 645463.CDR20291_0848.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CBE02943 ; CBE02943 ; CDR20291_0848 .
    GeneIDi 8467458.
    KEGGi cdl:CDR20291_0848.
    PATRICi 19455510. VBICloDif78408_0910.

    Phylogenomic databases

    eggNOGi COG0111.
    HOGENOMi HOG000136700.
    KOi K00058.
    OMAi FGRIGYQ.
    OrthoDBi EOG6VXFC3.

    Enzyme and pathway databases

    BioCyci CDIF645463:GJP4-923-MONOMER.

    Family and domain databases

    Gene3Di 3.40.50.720. 2 hits.
    InterProi IPR006139. D-isomer_2_OHA_DH_cat_dom.
    IPR006140. D-isomer_DH_NAD-bd.
    IPR016040. NAD(P)-bd_dom.
    [Graphical view ]
    Pfami PF00389. 2-Hacid_dh. 1 hit.
    PF02826. 2-Hacid_dh_C. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Comparative genome and phenotypic analysis of Clostridium difficile 027 strains provides insight into the evolution of a hypervirulent bacterium."
      Stabler R.A., He M., Dawson L., Martin M., Valiente E., Corton C., Lawley T.D., Sebaihia M., Quail M.A., Rose G., Gerding D.N., Gibert M., Popoff M.R., Parkhill J., Dougan G., Wren B.W.
      Genome Biol. 10:R102.1-R102.15(2009) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: R20291Imported.

    Entry informationi

    Entry nameiC9YJU8_PEPDR
    AccessioniPrimary (citable) accession number: C9YJU8
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 24, 2009
    Last sequence update: November 24, 2009
    Last modified: October 1, 2014
    This is version 38 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3