C9YJU8 (C9YJU8_CLODR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative D-3-phosphoglycerate dehydrogenase EMBL CBE02943.1

Gene names

Name:	serA EMBL CBE02943.1
Ordered Locus Names:	CDR20291_0848

Organism

Clostridium difficile (strain R20291) [Complete proteome] [HAMAP]

Taxonomic identifier

645463 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Clostridia › Clostridiales › Peptostreptococcaceae › Clostridium difficile

Protein attributes

Sequence length	313 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. RuleBase RU003719

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	L-serine biosynthetic process Inferred from electronic annotation. Source: InterPro
Molecular_function	NAD binding Inferred from electronic annotation. Source: InterPro phosphoglycerate dehydrogenase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C9YJU8 [UniParc]. Last modified November 24, 2009. Version 1. Checksum: 49503EA420A04067	FASTA	313	34,666
	10 20 30 40 50 60 MYNILVTDGI EKEAARKLRE LDFNVIEQFY EKDVLGDKLK DVDVLVVRSA TKVTKDVIDK 70 80 90 100 110 120 ALEGKKLKLI VRGGVGLDNI DVKYAQANGI KVMNTPNASS ISVAELTIGQ LFVLARFINT 130 140 150 160 170 180 ANVTMRDGKW EKKKYKGTEI NGKTLGLIGF GRIAKEVAKR AELLGMNVIY TDIMGEAQGF 190 200 210 220 230 240 NNYKFCDMEE VLENADFLSL HIPFDKNKGA VITEKEINKM KKGAYLINCA RGGLVDEKDL 250 260 270 280 290 300 LKALDEGKLS AAAIDVYEQE PTLNLDLVNH PRVSPTPHIG ASTVEAQERI GDEIVNVIQD 310 FFLDFNNLIG VAL

References

[1]

"Comparative genome and phenotypic analysis of Clostridium difficile 027 strains provides insight into the evolution of a hypervirulent bacterium." Stabler R.A., He M., Dawson L., Martin M., Valiente E., Corton C., Lawley T.D., Sebaihia M., Quail M.A., Rose G., Gerding D.N., Gibert M., Popoff M.R., Parkhill J., Dougan G., Wren B.W. Genome Biol. 10:R102.1-R102.15(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: R20291.

Cross-references

Sequence databases
EMBL GenBank DDBJ	FN545816 Genomic DNA. Translation: CBE02943.1.
RefSeq	YP_003217349.1. NC_013316.1.
3D structure databases
ProteinModelPortal	C9YJU8.
ModBase	Search...
Protein-protein interaction databases
STRING	645463.CDR20291_0848.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CBE02943; CBE02943; CDR20291_0848.
GeneID	8467458.
KEGG	cdl:CDR20291_0848.
PATRIC	19455510. VBICloDif78408_0910.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0111.
HOGENOM	HOG000136700.
KO	K00058.
OMA	CISRFIN.
Enzyme and pathway databases
BioCyc	CDIF645463:GJP4-923-MONOMER.
Family and domain databases
Gene3D	3.40.50.720. 2 hits.
InterPro	IPR006236. D-3-Phosphoglycerate_DH. IPR006139. D-isomer_2_OHA_DH_cat_dom. IPR006140. D-isomer_2_OHA_DH_NAD-bd. IPR016040. NAD(P)-bd_dom. [Graphical view]
PANTHER	PTHR10996:SF20. PTHR10996:SF20. 1 hit.
Pfam	PF00389. 2-Hacid_dh. 1 hit. PF02826. 2-Hacid_dh_C. 1 hit. [Graphical view]
PROSITE	PS00671. D_2_HYDROXYACID_DH_3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C9YJU8_CLODR

Accession

Primary (citable) accession number: C9YJU8

Entry history

Integrated into UniProtKB/TrEMBL:	November 24, 2009
Last sequence update:	November 24, 2009
Last modified:	May 1, 2013
This is version 28 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)