C9YJB0 (C9YJB0_CLODR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative radical SAM superfamily protein EMBL CBE02613.1

Gene names

Ordered Locus Names:

CDR20291_0659 EMBL CBE02613.1

Organism

Clostridium difficile (strain R20291) [Complete proteome] [HAMAP] EMBL CBE02613.1

Taxonomic identifier

645463 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Clostridia › Clostridiales › Peptostreptococcaceae › Clostridium difficile

Protein attributes

Sequence length	316 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	metabolic process Inferred from electronic annotation. Source: GOC
Molecular_function	catalytic activity Inferred from electronic annotation. Source: InterPro iron-sulfur cluster binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C9YJB0 [UniParc]. Last modified November 24, 2009. Version 1. Checksum: B1B8803E92D51EF9	FASTA	316	36,439
	10 20 30 40 50 60 MLRFMIRLSV GTAIELGILN KKSDIPPTTA YIMIGEKCIN KCSFCSQSIE SSTRKDKLSR 70 80 90 100 110 120 VIWPEFSKEE ILDALKAYKG KNIKRICIQS MASEEAHNSV LDFINYISGK IDMPISLSAK 130 140 150 160 170 180 LENDEQIKKF FSVGVDKIGI AIDASNKELY EKIKGNNYDE KLKFITEMSK SYPNKISTHI 190 200 210 220 230 240 IVGMGESHED IYNLYIYLKE NDVTISLFAF TPVRGTKMEK INQPSIESYR RVQLMSYMIN 250 260 270 280 290 300 KGYPKEYFKF KNGYLNSIKL DNDILKDINK GYPFEIRGCK DCNRPYYNER PGSTIYNYSR 310 PLNQSEIDLA IREINL

References

[1]

"Comparative genome and phenotypic analysis of Clostridium difficile 027 strains provides insight into the evolution of a hypervirulent bacterium." Stabler R.A., He M., Dawson L., Martin M., Valiente E., Corton C., Lawley T.D., Sebaihia M., Quail M.A., Rose G., Gerding D.N., Gibert M., Popoff M.R., Parkhill J., Dougan G., Wren B.W. Genome Biol. 10:R102-R102(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: R20291 EMBL CBE02613.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	FN545816 Genomic DNA. Translation: CBE02613.1.
RefSeq	YP_003217161.1. NC_013316.1.
3D structure databases
ProteinModelPortal	C9YJB0.
ModBase	Search...
Protein-protein interaction databases
STRING	645463.CDR20291_0659.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CBE02613; CBE02613; CDR20291_0659.
GeneID	8467321.
KEGG	cdl:CDR20291_0659.
PATRIC	19455120. VBICloDif78408_0716.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG2516.
HOGENOM	HOG000232254.
KO	K01012.
OMA	YYNERPG.
Enzyme and pathway databases
BioCyc	CDIF645463:GJP4-733-MONOMER.
Family and domain databases
Gene3D	3.20.20.70. 1 hit.
InterPro	IPR013785. Aldolase_TIM. IPR006638. Elp3/MiaB/NifB. IPR007197. rSAM. [Graphical view]
Pfam	PF04055. Radical_SAM. 1 hit. [Graphical view]
SMART	SM00729. Elp3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C9YJB0_CLODR

Accession

Primary (citable) accession number: C9YJB0

Entry history

Integrated into UniProtKB/TrEMBL:	November 24, 2009
Last sequence update:	November 24, 2009
Last modified:	May 29, 2013
This is version 21 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)